Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_1131 |
Symbol | |
ID | 4678207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 1148960 |
End bp | 1149808 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639843650 |
Product | putative phytoene synthase |
Protein accession | YP_990730 |
Protein GI | 121597019 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0886071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCGTTT CCAATCCCGT GGTGGACGAT AACGAAACCG ACGCCGCTGC CGTCACATCG GGCAGCTCTT TCTATCTCGC GATGCGCATC CTGCCCGCGG AGCAGCGCGA TGCGATGTTC CAGGTCTATG CGTTTTGCCG TGCGGTCGAC GACATCGCCG ACGAAGGCGG CGCGCGCGCG GAGCGCGCGG CGCAGCTCGA CCGCTGGCGT GCCGACATCG ACGATTGCTA CGCGGGCAAG CCGCGCGCGT CGCTCGTGCC GCTCGCGCGC GAGATCGGCA AGTTCGGCCT GCATCGCGAC GACTTTCACG CGATGATCGA CGGCATGGCG ATGGACGCCG CCGAGGACAT CTGCGCGCCC GACGAAGCCA CGCTCGATCT GTACTGCGAC CGCGTCGCGA GCTCGGCCGG CCGGCTATCG GTGAGGATTT TCGGGATGCC GGACGAGCCC GGCCGCGTGC TGTCGCATCA TCTCGGCCGC GCGCTGCAAC TGACGAATAT CCTGCGCGAC ATCGACGATG ACGCGGCGAT CAACCGTTGC TACCTGCCGC GCGAGCTGCT CGCGCGCGAG GGCATCGCGA TCGCCGATCC GCAGACGATC GCGCGCGATC CGTTGCTGCC GCGCGTGTGC GCGACGCTCG TCGAGCGCGC ACTGCACCAT TTCGCGCAGG CCGACGCGGT GATGGACGCG TCGCCGCGCG CGCAGGTTCG TGCGCCGCGC ATCATGTCGG GCGCGTATCG CCTGATTCTC GAAGCCGCGG TCGCGCGCGG CTTCGCGCCG CCGCGCGCGC CGCTACGCAA GCCGCGCGCG CGAATGCTGC TGCTCGCGGC GCGTTACGCG CTGTTTTGA
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Protein sequence | MAVSNPVVDD NETDAAAVTS GSSFYLAMRI LPAEQRDAMF QVYAFCRAVD DIADEGGARA ERAAQLDRWR ADIDDCYAGK PRASLVPLAR EIGKFGLHRD DFHAMIDGMA MDAAEDICAP DEATLDLYCD RVASSAGRLS VRIFGMPDEP GRVLSHHLGR ALQLTNILRD IDDDAAINRC YLPRELLARE GIAIADPQTI ARDPLLPRVC ATLVERALHH FAQADAVMDA SPRAQVRAPR IMSGAYRLIL EAAVARGFAP PRAPLRKPRA RMLLLAARYA LF
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