| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1119 |
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| Symbol | |
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| ID | 4678108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1135806 |
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| End bp | 1139057 |
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| Gene Length | 3252 bp |
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| Protein Length | 1083 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639843637 |
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| Product | hypothetical protein |
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| Protein accession | YP_990717 |
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| Protein GI | 121597431 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.143143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGC CTTTGCCCAC CACCAATGCC GAACGGCCCG ATGTCGATCG GTCGAGTGTC
CCCCCCAGCC TCCTGGTGAA TATTTATTCG ATTACGCATC GCGGCGGCGA TATGCAATCC
ATAAATCCAT TAATGCATTG GCGTAAAGTA ACATACGCGC TTACACACCT ATGTTCGCCA
AACTACACAT CTTCTTGCGC ATTTACGCAT CGAATATGCA TGACATCGCG CGGCGCCGGC
TCGAAGCAAA AGTCAAAGTC GCGACACTAT TTGTTAAATA TCTTGAATTA CCCGACTAAA
AATCGATATT CGCGCGCGGC ACTCCGGATT GGCGTGCCGT CGCGAACGAA TCGGCGCATC
GCGCGGCCTC GGTGCGCCGA TTTCCATGCA TCGCCCGCGG CGGCACGCCT TCCCCGTCGC
CGTCGCGACA AAGACATATC GCCCGGGCTT CCGCGCGCGC GTTTTCGCCC CGTCGCGCTC
TGCGTCGCCC TCTCATTCCC ACCCCATTTC GCAACAATCC GGCTGGATTC ACGCGTATCG
GAACCCAGCC GACTCCGAAA CCCGCGCGCC GGTATACTTG GACACTTTGC CTTTTCGCAG
CCCCCAACCC GCCGCCTCAT GCTGACTTCC GTCCTCGTCC GACTCGTCGC CTGGTCGGTG
CGGCGCCCGA TCTGGGTCGT CGTGCTGTCG CTCGTCATCG CCGCGCTCAG CAGCGTCTAC
GTCGCGCACC ATTTCAAGAT CAACACCGAC ATCAGCAAGC TCGTCGAGAA CGACCCGAAA
TGGGCGGCGC TCGGCCGCGC GATCGACGAC GCGTTCCCGC AGCGCAACCA GACGATCCTC
GCCGTCGTCG AGGCGCCCGC GCCCGAATTC GCCGGCGCCG CCGCCGACGC GCTCGCCGAG
GGCTTGCGCC GCGAGACCGA GGCGGGCCGC ATCGGCCAGG TGTCGGAGCC CGCGGGCGGC
CCGCTCTTCG AGCACGACGG GCTGCTGTTC CTGCCCGAGC AGGACGTCGC GACGACGACC
GCGCAGCTCG CGAGCGCGCG GCCGCTCATC AACGTGCTTG CGAAAGACCC GAGCATCGCG
GGCCTCGCGA CGACGCTGTC GACGACGCTC GGCGTGCCGT TGCAATCGGG GCAGGTCAAG
CTCTCGGGCA TGGCGAAGCT GCTCTCGCGC AGCGCGGCCA CCGTCGACGA CGTGCTCGCC
GGCAAGCCGG CCGCGTTCTC GTGGCGCGCG CTCGTCGATG CCGACGCGGC CCGCGAGCCC
GCGCGCGCGT TCGTCACCGT GCAGCCCGTC GTCAACTACG GCGCGCTGAA GGCGGGCGAG
CAGGCTTCGC GCACGATCCG CGCGACCGCG CAGGCGCTCA AGCTCGACGA GCGCTTCGGC
GCCGCCGTGC GGCTCACGGG CGAGCAGCCG CTCGCCGACG AGGAATTCGC GTCGGTCCAG
GACGGCGCGC TCGTCAACGG CATCGCGACG CTCGCGATCG TGCTCGTGAT CCTGTGGATC
GCGCTGCGCT CGAAGCGGAT GATCGCGTCC GTGTTCGTCA CGCTGTTCGT CGGCCTGGTC
GTCACGGCCG CGCTCGGGCT GATGATGGTC GGCTCGCTGA ACATGATCTC GGTCGCGTTC
ATGGTGCTGT TCGTCGGCCT CGGTGTCGAT TTCGCGATCC AGTACGGCGT CAAGTATCGC
GAGGAGCGGC ACCGCGATCC GAATCTCGAC CACGCGCTCG TCGGCGCCGC GCACGCGATG
GGCATGCCGC TCACGCTCGC GACGGCGGCC GTCGCCGCGA GCTTCTTCTC GTTTCTGCCG
ACCGCGTACC GCGGCGTATC GGAGCTCGGC CTGATCGCGG GCGTCGGGAT GTTCGTCGCG
CTCTTCACGA CGCTCACGCT GCTGCCCGCG CTGCTCAAGC TGCTCGCACC GCCCGGCGAG
CGCAAGCCGC CCGGCTTTCC CCGCCTCGCG CCGGTCGACG ACTATCTCGA CCATCATCGC
AAGCCGATCC TGATCGGCAC GCTCGCCGTC GTGATCGGCG CGCTGCCGCT CCTCGCGCAT
CTGCGTTTCG ATTTCAATCC GCTGCATCTG AAGGATCCGC GCAGCGAATC GATGGCGACG
CTGCTCGCGC TGAAGGATTC GCCGGAGGCG TCGGTCAACG ACGTGTCGCT GCTCGCGCCG
TCGCTCGCGG CCGCGAACGC CGCCGCGCAG CGCCTCGGCG CGCTGCCCGA AGTCGGCCGC
ACGACGACGC TGTCGACCTT CATTCCCGAC GCGCAGCCGC AAAAGCTCGC GACGATCGCG
GCCGCCGCGC GCGGGCTGCT GCCGGCGCTC ACGCAGCCGG CCGCCGCGCC CGTGCCCGAC
GCGCAGCGCG TGGCGGCGCT CAAGCGCGCG TCGAACCTGC TCGAATACGC ATCCGAGGAC
TATCCGGGGC CGGGCGCGGC GGCGGCCAAG CATCTGTCGG AATCGCTCGC GAAGCTCGCC
GCCGCCGATG CGGCGACGCG CGAGCGCGCG GAGCACGCGT TCTCCGTGCC GCTGAAGATC
GCGCTGAACC AGCTCGCGAT GCTGCTGCAG CCGTCGGAGA TCACGCGCGA GAACCTGCCG
CCGCAGATCG TGCGCGACTG GATCGCGCCG GACGGCCGCG CGCTCGTGCA GATCTCGCCG
AAGGTGGTCA AGGGCGCCGA TCCGGGCGAC GACGCGATGC TGCGCCGCTT CGCGAAGGCC
GTGAAAGCGG CCGATCCGGG CGCGATCGGC GGGCCGATCT CGATCCTGCA TTCGGCGGAC
ACGATCATCC GCGCGTTCCT GCAGGCGGCC GCGCTGTCCG TCGTGTCGAT CACGGTGCTG
CTGTGGATCA CGCTGCGCCG CTTCGGCGAC GTGCTGCGCA CGCTCGTGCC GCTCCTCGTG
TCGGGCGTCG TGACGCTCGA GCTGTGCGTG CTGCTCGGGA TGCCGCTCAA TTTCGCGAAC
ATCATCGCGC TGCCGCTGAT GCTCGGCGTG GGCGTCGCGT TCAAGGTGTA TTTCGTGATG
GCGTGGCGCG CGGGCCAGAC GGGCCTGCTG CAGTCGAGCC TCACGCACGC GGTGCTGTTC
AGCGCCGCGA CGACGGCCAC CGCGTTCGGC AGCCTGTGGC TGTCGCATCA TCCGGGCACG
GCAAGCATGG GGCGGCTGCT CGCGCTCGCG CTGTCGTGCA CGCTGATCGG CGCCGTCGTG
TTCCAGCCCG TGCTGATGGG CAAGCCGCGC ACGAAGCGCG TGACGAATCA ATCGCAAGGA
ATCGATGAAT AA
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| Protein sequence | MRLPLPTTNA ERPDVDRSSV PPSLLVNIYS ITHRGGDMQS INPLMHWRKV TYALTHLCSP
NYTSSCAFTH RICMTSRGAG SKQKSKSRHY LLNILNYPTK NRYSRAALRI GVPSRTNRRI
ARPRCADFHA SPAAARLPRR RRDKDISPGL PRARFRPVAL CVALSFPPHF ATIRLDSRVS
EPSRLRNPRA GILGHFAFSQ PPTRRLMLTS VLVRLVAWSV RRPIWVVVLS LVIAALSSVY
VAHHFKINTD ISKLVENDPK WAALGRAIDD AFPQRNQTIL AVVEAPAPEF AGAAADALAE
GLRRETEAGR IGQVSEPAGG PLFEHDGLLF LPEQDVATTT AQLASARPLI NVLAKDPSIA
GLATTLSTTL GVPLQSGQVK LSGMAKLLSR SAATVDDVLA GKPAAFSWRA LVDADAAREP
ARAFVTVQPV VNYGALKAGE QASRTIRATA QALKLDERFG AAVRLTGEQP LADEEFASVQ
DGALVNGIAT LAIVLVILWI ALRSKRMIAS VFVTLFVGLV VTAALGLMMV GSLNMISVAF
MVLFVGLGVD FAIQYGVKYR EERHRDPNLD HALVGAAHAM GMPLTLATAA VAASFFSFLP
TAYRGVSELG LIAGVGMFVA LFTTLTLLPA LLKLLAPPGE RKPPGFPRLA PVDDYLDHHR
KPILIGTLAV VIGALPLLAH LRFDFNPLHL KDPRSESMAT LLALKDSPEA SVNDVSLLAP
SLAAANAAAQ RLGALPEVGR TTTLSTFIPD AQPQKLATIA AAARGLLPAL TQPAAAPVPD
AQRVAALKRA SNLLEYASED YPGPGAAAAK HLSESLAKLA AADAATRERA EHAFSVPLKI
ALNQLAMLLQ PSEITRENLP PQIVRDWIAP DGRALVQISP KVVKGADPGD DAMLRRFAKA
VKAADPGAIG GPISILHSAD TIIRAFLQAA ALSVVSITVL LWITLRRFGD VLRTLVPLLV
SGVVTLELCV LLGMPLNFAN IIALPLMLGV GVAFKVYFVM AWRAGQTGLL QSSLTHAVLF
SAATTATAFG SLWLSHHPGT ASMGRLLALA LSCTLIGAVV FQPVLMGKPR TKRVTNQSQG
IDE
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