Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0969 |
Symbol | |
ID | 4677571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 983005 |
End bp | 984084 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639843488 |
Product | putative outer membrane porin |
Protein accession | YP_990568 |
Protein GI | 121598175 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.449227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAC GACTGTCCGC GCTTTGCGGA CTGGGCCTCG CCTCGGCCGG CGCATGCGCG CAAACGAGCG TGACGCTTTA CGGCGTCGCG GACGCGTACG TCGAGTACGC GACGAACCAG GCGGACGCGA AAGGCGAGCC CGCCGCGCTC GCGCGAATGG GCTCGGGCGG CAAGAGCGGC TCACGCTGGG GAATCAAGGG CACCGAAGTG CTCGGCGGCG GCTGGCGCGC CGCGTTCCGG CTCGAGAGCG GCGTCAACCT GAACAACGGC GCCGGCACGG GCGCGGTCGG CTTCGACCGC TCCGCGTGGG TCGGGCTCGA GCATCCGCGC TGGGGCGCGC TGCGCTTCGG TCGCCAATAC ACGACGATGT TCGACATCAT GGAGCACTAC TCGCCGACGG GCGCGTATTC GACGCTGTAC GAACCGGACG GCGCGATCGT CGGCATCAGC TTTCGCGAGA ACAACGTCGT CAAATATCTG GCGACGGCCG GCCCGCTCAC GTTCGAAGCG CACTACGCGT TCAGCAACGA ACCGGGCGCG TTCCAGGCGA GCGCCGCGCA CGGCGCGGGC TTCGAGTACA CGGGCGGCGC GCTGTCGTTC GCGTTCGCAT ACGACGACGT GCACACGCCG CAAGCCGGCG GCTTCGCGTA CTTGCGCCGC TACGCGGCCG CCGCGATGCT GACCGTCGAG GCGACGCAAC TGATCGCGGG CGCCGCGCAC GGGCAAGGCA ACGTCGCGAC GCCATCGGTC GTCACGCGCT ACACGTTCTG GTGGATCGGC GTGCGTCAGG CGATCACACC CGTCGTTCAA CTGATCGGCG CGCTGTATGC GGAGCGCGTG CGCGCGCAAA ACCCGGCGAG CCCGCCCGCC GCGCGACATG CGTCGGGCAC GCCGCAGCAG GCGACGCTGC AGTTGAACTA CTTCGTCTCG AAAACCACGA CGCTGTACGC GGCAACCGGT TACGCGCGCC ACGCGGCGCT CGATTTCGAC AACTATAACT ACGGCTTCCT CCACTACTCG CTCGCCGGCG CGCGCGCCGG CAGCGCGGGC GTCGCCGTCG GCGTGCGCAA GTTGTTCTGA
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Protein sequence | MDKRLSALCG LGLASAGACA QTSVTLYGVA DAYVEYATNQ ADAKGEPAAL ARMGSGGKSG SRWGIKGTEV LGGGWRAAFR LESGVNLNNG AGTGAVGFDR SAWVGLEHPR WGALRFGRQY TTMFDIMEHY SPTGAYSTLY EPDGAIVGIS FRENNVVKYL ATAGPLTFEA HYAFSNEPGA FQASAAHGAG FEYTGGALSF AFAYDDVHTP QAGGFAYLRR YAAAAMLTVE ATQLIAGAAH GQGNVATPSV VTRYTFWWIG VRQAITPVVQ LIGALYAERV RAQNPASPPA ARHASGTPQQ ATLQLNYFVS KTTTLYAATG YARHAALDFD NYNYGFLHYS LAGARAGSAG VAVGVRKLF
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