| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0854 |
|---|
| Symbol | |
|---|
| ID | 4677299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | + |
|---|
| Start bp | 862810 |
|---|
| End bp | 865995 |
|---|
| Gene Length | 3186 bp |
|---|
| Protein Length | 1061 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639843374 |
|---|
| Product | copper-translocating P-type ATPase |
|---|
| Protein accession | YP_990454 |
|---|
| Protein GI | 121597100 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC TGTTCGCTCC CGCCGCCCCG ATCACGACGA CACTGCTCGT CGAAGGCATG
CATTGCGGCG GCTGTACGTC GCGCGTCGAG CAGGCGCTCG CCCAGGTGCC GGGCGTGACC
GGCGCGGTGG CGGATCTCGC CGCGGGCACG GCGACCGTCG CCGCGGCATC CGCCATCGAC
ACGGCTCGCC TCGTCGCCGC GCTCGACGCG GCCGGCTATC GCGCGACGGT CGCGACGGCG
CCCGCCGCGA CCGGAAACGC GGATGCGCGC CACGGCCGCG CGCGAGACGA GGATGACGAT
GCCGCCGCCG CGCCGCACAC GGCGGCGGTC ACGCTGACCA TCGGCGGCAT GACCTGCGGC
GGCTGCGCGC GGCGCGTCGA GCAGGCGCTC GCGGCCGTGC GCGGCGTGGC GGATGCGAAG
GTGGATCTCG CGACGACGAG CGCGAAGGCA AGCGTCGCGC GCGACGTCGA CTCGCAGACG
CTCGTCGCGG CCGTCGAGCA AGCCGGGTAT CGAGCGAACG TCGTGCGGGA CGCGCGCGCC
GAAGCCGCGC CGAAGCCCGC CGCATGCCCG TTCGAGGACG CAGCCCGTTC GGCCGCGCCG
GCCGCCGCGT TCGCGGTCGA CGAATCGAGC GCCGCGTCTC CGGAACGCGT GGCGACGCAG
TCGTTCGAAT TCGACATCGC GGGCATGACC TGCGCGTCCT GCGTCGGCCG CGTCGAAAAG
GCGCTGGCGC AAGTGCCCGG CGTCGTCCGC GCGACGGTCA ATCTCGCCAC CGAAAAAGCC
GCCGTCGACG CCGATGCAGA CGCCCACGTC GACACCGCGC GGCTCATCGA CGCGGTGAAG
CGAGCGGGCT ATCGCGCGTC ACCGGTGAGC GATACGGCAA GCGCTCTCGC ACCGTCGCCG
GAAATCGCCG CCGCGCGCAC GGCAATCGAA CTCGACATCG CGGGCATGAC CTGCGCGTCC
TGCGTCGGCC GCGTCGAGAA GGCGCTGGCG CAAGTGCCCG GCGTCGCCCG CGCGACGGTC
AATCTCGCCA CCGAAAAAGC CACCGTCGAT GCCGATGCAG ACGCCCATGT CGACACCGCG
CGGCTCATCG ACGCGGTGAA GCGGGCAGGC TATCGCGCGT CGCCGGCCAT CGCGGCTTGC
GCCCCGGCAT CCCGCGCAAC CGCAACCGCG GACGCGGCCG CCGCCCGCCC CGCCTCGCCG
AGCGCCGACG ATCGCAAGCT CGCCGAAGCG CGCCGCGAGC GGGCGCTCGT GATCGCGTCC
GCGGTGCTGA CCACGCCGCT CGCCCTGCCA ATGTTCGCCG CGCCGTTCGG CGTCGACGCG
GCGCTGCCCG CGTGGCTGCA GCTCGCGCTC GCATCGATCG TGCAGTTCGG CTTCGGCGCG
CGCTTCTATC GCGCCGCATG GCACGCGCTG AAGGCTCGCG CCGGCAACAT GGACCTGCTC
GTCGCGCTCG GCACGTCGGC CGCGTACGGC CTGAGCATCT GGCTGATGCT GCGCGACCCC
GGCCATGCCG CGCACCTGTA CTTCGAGGCG TCCGCCGTGA TCGTCACGCT CGTGCGCTTC
GGCAAATGGC TCGAGGCGCG CGCGAAGCGG CAGACCACCG ACGCGATCCG CGCACTCAAC
GCACTGCGCC CCGATCGCGC GCGCATCGTC GAGCACGGCG TCGAGCGCGA CGTGCCGCTC
GCGCAGGTGC GCGTCGGCAC CGTCGTGCGC GTGCTGCCGG GCGAGCGCGT GCCCGTCGAC
GGCCGGATCG AGGCGGGCGT CACGCATGTC GACGAATCGC TGATCACGGG CGAGAGCCTG
CCCGTGCCGA AGGAGCCCGG CGAGCGCGTG ACCGCCGGCT CGATCAACGG CGAAGGCGCG
CTCACCGTCG CGACGACCGC GATCGGCGCC GAGACGACGC TCGCGCGCAT CATCCGCCTC
GTCGAATCCG CGCAGGCCGA AAAAGCGCCG ATCCAGCGCC TCGTCGACCG CGTGAGCGCC
GTGTTCGTGC CCGCGATCGT CGCGATCGCG TTCGCCACGT TCGCCGGCTG GCTCGTCGCG
GGCGCGGGCG TCGAGACGGC GATCCTCAAC GCGGTCGCGG TGCTCGTGAT CGCGTGCCCG
TGCGCGCTCG GCCTCGCGAC GCCTGCCGCG ATCATGGCGG GCACGGGCGT CGCCGCGCGG
CACGGCGTAC TGATCAAGGA TGCGCAGGCG CTCGAGCTCG CGCAGCGCGC GCGCATCGTC
GCGTTCGACA AAACCGGCAC GCTGACGCAA GGCAGGCCGA CCGTCACCGC GTTCGACGCG
ATCGGCATTC CGCGTGGCGA TGCGCTCGCG CTCGCCGCCG CCGTCCAGCG CGCGAGCGCG
CATCCGCTCG CGCGCGCGGT CGTCGCCGCG TTCGACGCCG ATGCCGACGC GCGCCGCTCG
TCCCTCGCCG CCGCGCACGC CGATACGCCG CGCGCGGTCG CGGGTCGCGG CGTCGAGGCG
CGCGTCGACG CTCGCCTGCT CGCGCTCGGC AGCACGCGCT GGCGCGATGA ACTCGGCATC
GCCGTGCCCG ACGGCGTCGC GCGCCGCGCG GCGGCGCTCG AAGCGGCGGG CAACACGGTA
TCGTGGCTGA TGCGCGCCGA CGCGCCGCGC GAGGCGCTCG CACTCGTCGC GTTCGGTGAC
ACGGTCAAGC CGAACGCGCG GCGCGCGATC GAGCGGCTCG CCGCGCGCGG CATCAGGAGC
GCGCTCGTGA CGGGCGACAA CCGCGGCAGC GCGACAGCCG TCGCCGCGTC GCTCGGCATC
GACGAAGTGC ACGCGCAGGT GCTGCCGGAC GACAAGGCGC GCGTCGTCGC GCAATTGAAG
GCGACGGCGG GCGACGGCGC GGTCGCGATG GTCGGCGACG GCATCAACGA TGCGCCCGCG
CTCGCCGCGG CCGACGTCGG CATCGCGATG GCGACGGGCA CCGACGTCGC GATGCACACC
GCCGGCATCA CGCTGATGCG CGGCGATCCG GCGCTCGTCG CGGACGCGGT CGACATCTCG
CGCCGCACGT ACCGGAAGAT TCAGCAGAAC CTGTTCTGGG CGTTCGTCTA CAACCTGGTG
GGGATTCCGC TCGCGGCGCT CGGCTGGCTG AACCCGATGA TCGCGGGCGC GGCGATGGCG
TTCTCCAGCG TGAGCGTCGT GACGAACGCA CTGTTGCTGC GGCGCTGGAA GGGCGACGCG
CGCTAA
|
|---|
| Protein sequence | MTKLFAPAAP ITTTLLVEGM HCGGCTSRVE QALAQVPGVT GAVADLAAGT ATVAAASAID
TARLVAALDA AGYRATVATA PAATGNADAR HGRARDEDDD AAAAPHTAAV TLTIGGMTCG
GCARRVEQAL AAVRGVADAK VDLATTSAKA SVARDVDSQT LVAAVEQAGY RANVVRDARA
EAAPKPAACP FEDAARSAAP AAAFAVDESS AASPERVATQ SFEFDIAGMT CASCVGRVEK
ALAQVPGVVR ATVNLATEKA AVDADADAHV DTARLIDAVK RAGYRASPVS DTASALAPSP
EIAAARTAIE LDIAGMTCAS CVGRVEKALA QVPGVARATV NLATEKATVD ADADAHVDTA
RLIDAVKRAG YRASPAIAAC APASRATATA DAAAARPASP SADDRKLAEA RRERALVIAS
AVLTTPLALP MFAAPFGVDA ALPAWLQLAL ASIVQFGFGA RFYRAAWHAL KARAGNMDLL
VALGTSAAYG LSIWLMLRDP GHAAHLYFEA SAVIVTLVRF GKWLEARAKR QTTDAIRALN
ALRPDRARIV EHGVERDVPL AQVRVGTVVR VLPGERVPVD GRIEAGVTHV DESLITGESL
PVPKEPGERV TAGSINGEGA LTVATTAIGA ETTLARIIRL VESAQAEKAP IQRLVDRVSA
VFVPAIVAIA FATFAGWLVA GAGVETAILN AVAVLVIACP CALGLATPAA IMAGTGVAAR
HGVLIKDAQA LELAQRARIV AFDKTGTLTQ GRPTVTAFDA IGIPRGDALA LAAAVQRASA
HPLARAVVAA FDADADARRS SLAAAHADTP RAVAGRGVEA RVDARLLALG STRWRDELGI
AVPDGVARRA AALEAAGNTV SWLMRADAPR EALALVAFGD TVKPNARRAI ERLAARGIRS
ALVTGDNRGS ATAVAASLGI DEVHAQVLPD DKARVVAQLK ATAGDGAVAM VGDGINDAPA
LAAADVGIAM ATGTDVAMHT AGITLMRGDP ALVADAVDIS RRTYRKIQQN LFWAFVYNLV
GIPLAALGWL NPMIAGAAMA FSSVSVVTNA LLLRRWKGDA R
|
|---|
| |