Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0696 |
Symbol | |
ID | 4677832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 700042 |
End bp | 700908 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639843220 |
Product | quaternary amine ABC transporter periplasmic substrate-binding protein |
Protein accession | YP_990301 |
Protein GI | 121597292 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.320892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAAG CGATGAAACG ATACGAATCC ATTGCGCGGC GGCTCGCGCG CCGCGCGGCA GCCGCATCGC CGGCGTTCGC GGCGTTGGCA TGGTGCGCCG CGGCGGCCGC CGCCACGACC ACGGCAGCCG CGGCGGAGCC GGCCGCCTGT CGCGACGTGC GGATGGCCGG CCCCGGCTGG ACCGATATCG AAGCGACGAA CGCGCTCGCG GGCGTCGTGC TGAAGGCGCT CGGTTACCGG CAGAGCGTGT CGAACCTGTC GGTGCCGATC ACGTATCAAG GTCTGAAGAA AGGGCAGCTC GACGTGTTCC TCGGCAACTG GATGCCGGCG CAGGCGCCGC TCGTCAAGCC GTTCGTCGAC GCGCGCGCGA TCGACGTGCT CCACGCGAAC CTGAGCCATG CGAAATTCAC GCTCGCGGTG CCGGACTACG TGGCGGCGGC GGGCGTGCAT TCGTTCGCCG ACCTCGCGAA GTACGCGCAG CGCTTCGGCG CGAAGATCTA CGGCATCGAG CCGGGCGCGC CGGCCAATCA GAACATCTCG CGCATGCTCG CCGACAAGGC GCTCGGGCCG GCGAACTGGC AGCTCGTCGA ATCGAGCGAG ACCGGGATGC TGACGCAGGT CGAGCGCGCG GATTTCGCGA GCCAGTGCGC GAATCTCGCG CGGCTGTTCC GACAAATGAC GTTCACCGTC GATCTGGAGA ACGGAATGAT CGCCGCGATG CTGCAGGGCA AGCGCTCCGC CGTGGATGCC GCGCAACACG CGCTGCGTGC GAACCCGTCG CTCGTCGAAG CATGGCTCGA CGGCGTGCGC ACCGCGAGCG GCGCGCCAGG CTTGCCTGCG GTGCGCGCGG CGCTCGATGC GCAATGA
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Protein sequence | MEQAMKRYES IARRLARRAA AASPAFAALA WCAAAAAATT TAAAAEPAAC RDVRMAGPGW TDIEATNALA GVVLKALGYR QSVSNLSVPI TYQGLKKGQL DVFLGNWMPA QAPLVKPFVD ARAIDVLHAN LSHAKFTLAV PDYVAAAGVH SFADLAKYAQ RFGAKIYGIE PGAPANQNIS RMLADKALGP ANWQLVESSE TGMLTQVERA DFASQCANLA RLFRQMTFTV DLENGMIAAM LQGKRSAVDA AQHALRANPS LVEAWLDGVR TASGAPGLPA VRAALDAQ
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