Gene BMASAVP1_0573 details

Gene Information

• Locus tag: BMASAVP1_0573
• ID: 4677006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 579542
• End bp: 580240
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639843099
• Product: TetR family transcriptional regulator
• Protein accession: YP_990182
• Protein GI: 121597204
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0810713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCCGT CCGATCACGC CAAAATGAAA CAAGGAAGCA AGGCCGCAGC GCCCGACGCC 
GAAGCGCGGC GAGACGAGGC GCGCCGCAAA TACGACCCCG AGCAGACGAA GCGCAATATT 
CTCGACGTCG CCACGCAGGA ATTCTCCGCG ATGGGACTGT CGGGGGCGCG CGTCGACGCG 
ATCGCCGAAC GTACGAACAC GACGAAGCGG ATGCTCTATT ACTACTTCGA CAGCAAGGAA 
GGGTTGTACG AGGCAGTGCT GGAGAAGGTC TACGGCGACA TCCGCACGCT CGAGCGCGAA 
CTGAACGTCG GCGAGCTGGA GCCGCGCGAA GGGCTGAGCC GGCTCGTCGA ATTCACGTTC 
GACTATCACG ACAGGCATCG CGATTTCGTG CGCCTCGTGA CGATCGAGAA CATTCACGGC 
GCGAAATACA TCGAGCAGTT GAAGTCGTTC AAGAACCGCA ACGTCAGCAT CATCAAGACG 
CTCGAGGAAC TGCTCGCGCG CGGCGTCGAA AGCGGCGTGT TCCGCGACGA CGTCGATCCG 
TTCGATCTGC ATCTGCTCAT CAGCTCGTTC TGCTTTCATC GCGTCGCGAA CCGCTATACG 
TTCGGCACGG CGTTCGGCCG CGATCCGTCG TCGCCGCGGC TGCGCGCGCG GCATCGGGCG 
ATGATCACCG ACACCGTGCT GCGCTACGTC GCCCGCTGA 

 

Protein sequence

MPPSDHAKMK QGSKAAAPDA EARRDEARRK YDPEQTKRNI LDVATQEFSA MGLSGARVDA 
IAERTNTTKR MLYYYFDSKE GLYEAVLEKV YGDIRTLERE LNVGELEPRE GLSRLVEFTF 
DYHDRHRDFV RLVTIENIHG AKYIEQLKSF KNRNVSIIKT LEELLARGVE SGVFRDDVDP 
FDLHLLISSF CFHRVANRYT FGTAFGRDPS SPRLRARHRA MITDTVLRYV AR