Gene BMASAVP1_0533 details

Gene Information

• Locus tag: BMASAVP1_0533
• ID: 4677877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 536945
• End bp: 537634
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639843059
• Product: YadA-like C-terminal region protein
• Protein accession: YP_990142
• Protein GI: 121596933
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACTCGC TGTCCACCGG CCTGTCGACG ACGAACACGA GCGTCGCGTC GCTGTCGACG 
AGCGTGACCA ACCTCAACAC GCAGCTCACG TCGCTGTCGA CGACGATCGT CAACAGCACG 
AACAACGTGA TCCGCGCGCT GCCGGCGAGC ACGGGCATCG CCGCCGACAT GAGCGCGCCG 
AACGCCGCCG CGCCGTCCGT CACGGCCGGC TCGAACTCGG TCGCGCTCGG CGCGAACTCG 
ACCGACGGCG GCCGCTCGAA CGTCGTCTCG GTCGGCAGCG CCACGCAGCA GCGGCAAATC 
ACGAACGTCG CCGCCGGCAC CGAAGGCACC GACGCGGTCA ACGTCAACCA GTTGAATGCG 
CTGTCCACTT CTATGTCACA ATCTCTGGCG GGCCAGCAGG GCCAGATCAA CAATCTGGGC 
TCGCAGCTGA CCCAGACTCA GCAAGCGCTG CAGCAGACCG ATACGATGGC CCGTCAGGGC 
ATCGCGGCCG CCACCGCGCT GACGATGCTG CCGCAGGTCG AGCCGGGCAA GACGATCAAT 
GTCGCCGTCG GCGTCGCCCG CTTCGCAGGT CAGTCGGGGA TGGCGTTCGG CGCGAGCGCG 
CACGTGACAA CCAACGGCAT TCTCAAACTG GGCATCGGCG TGTCGGGGCA GAACAAGACC 
TTCGGTGCAG GATATGGATA TAGCTGGTGA 

 

Protein sequence

MNSLSTGLST TNTSVASLST SVTNLNTQLT SLSTTIVNST NNVIRALPAS TGIAADMSAP 
NAAAPSVTAG SNSVALGANS TDGGRSNVVS VGSATQQRQI TNVAAGTEGT DAVNVNQLNA 
LSTSMSQSLA GQQGQINNLG SQLTQTQQAL QQTDTMARQG IAAATALTML PQVEPGKTIN 
VAVGVARFAG QSGMAFGASA HVTTNGILKL GIGVSGQNKT FGAGYGYSW