Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0456 |
Symbol | |
ID | 4677275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 463528 |
End bp | 464901 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639842983 |
Product | multidrug resistance protein |
Protein accession | YP_990066 |
Protein GI | 121596970 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATACGA GAGATTCGAC CGAGACCGAG CATCGAAGCG TCCCGCGCCG CGCCGCAGCG GCGCCCGGGC CCGTCCGATC CGCGCCTGCC GGCGCCACCG ACATCACGCA CGCCACCATC TTGAACGACA CCGCCACCGA CACTGCGCGC GCGAAGGCGC CCACCGATCC GGCCGTTTCC GACGGCGCGC CCGCGAGCGG GCACGGCTTG CCTGCGTCGC CCGAAACCGC CGCGACGCTT GCCGCGCGCC GGGCCACGCG CCGCCGCCGC TTCGCATGGT TCTTCGGAGT GCTGGCGATC GTCGCGCTGG GCGCGGCGCT CTACTGGTTC ATCGTGGGCC GCTTCAGCGA AGAGACGGAC GATGCGTACG TGGCGGGCAA CGTCGTGCAG ATCGCCGCGC AGATCCAGGG GACGGTGACC GACGTGCTGG TGGCCGACAC GCAGCAGGTA AAGGCGGGGC AGGCGCTGGT GCGGCTCGAC GACGCGGAGG CGGCGGCGGC GTTCGCGCAG GCGCAGGCGC AGCTCGCGCA GGCGGTGCGG CAAGTGGCGA ACACGCGGCT GTCGATGCAG ACGTACGAGC AGACGGTGAA GGCGCGCGAG GCGGATCTGA AGCTCGCGCA GCAGGCGTAT CGGGCGCGGG CGGGGGCGTC GGTGGAGGTG GTGGCGCCGG AGGAGCTGGC GCGGGCGAAG TCGTCGCTGG CGAACGCGCA GGCGGCGCTG GCGGGAGCGC AGGCGCAACG GGAGGCGGCG CGCGCGCTGG GCAGCGAGCG GCCGGTCGGG CAGAACCCGG CGGTGCAGCA GGCGGCCGCG CAGTTCAAGC TGGCGTACCG GAACCTGAAG CGCACGACGA TCGTGTCGCC GGTGGACGGG ACGGTCGGGC AGCGGTCGGT GCAGATCGGG CAGCAGGTGG GGCCGGGGGT GCCGCTGATG TCGGTGGTGC AGTTGCGGCA GGTGTGGGTG GAGGCGAACT TCAAGGAAGG GCAGTTGCGG CACATGCGGG TGGGCCAGCC GGTGCGGCTC GAATCGGACC TGTACGGCGC GCGGGTGACG TATCACGGCC GAGTGGAGGG CTTCTCGGCG GGCACGGGCA GCGCGTTCTC GATGCTGCCG TCGCAGAACG CGGCGGGGAA CTGGATCAAG GTGGTGCAGC GCTTGCCGGT GGTGATCTCG CTGGAGCCGT CGGAGCTGGC GGCGCACCCG TTGCGGGTGG GGCTGTCGAT GCGCGCGACG GTGCAGACGA AGGCGCGCGG CGGGCATCTG CTGGACGGCG ACGCGCCGCT GCCGGCGCAG CGCACGCGGG TGCACGAAAT GCACGCGGGC GAGGCGGAGG CGGCGGCCGA GGCGGTGATC CGCGCGAACG ACGGTGGGCA GTGA
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Protein sequence | MYTRDSTETE HRSVPRRAAA APGPVRSAPA GATDITHATI LNDTATDTAR AKAPTDPAVS DGAPASGHGL PASPETAATL AARRATRRRR FAWFFGVLAI VALGAALYWF IVGRFSEETD DAYVAGNVVQ IAAQIQGTVT DVLVADTQQV KAGQALVRLD DAEAAAAFAQ AQAQLAQAVR QVANTRLSMQ TYEQTVKARE ADLKLAQQAY RARAGASVEV VAPEELARAK SSLANAQAAL AGAQAQREAA RALGSERPVG QNPAVQQAAA QFKLAYRNLK RTTIVSPVDG TVGQRSVQIG QQVGPGVPLM SVVQLRQVWV EANFKEGQLR HMRVGQPVRL ESDLYGARVT YHGRVEGFSA GTGSAFSMLP SQNAAGNWIK VVQRLPVVIS LEPSELAAHP LRVGLSMRAT VQTKARGGHL LDGDAPLPAQ RTRVHEMHAG EAEAAAEAVI RANDGGQ
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