Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0399 |
Symbol | |
ID | 4677941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 409531 |
End bp | 410439 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639842926 |
Product | putative dipeptide ABC transporter, permease protein |
Protein accession | YP_990009 |
Protein GI | 121597280 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.19947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCGA CTGTTTCCTC CCCCCCTTCC GCACCCGCTT CGGCCGGCGC GCCAGCCGCG ATCCGCACGC CGTGGAGCGA GTTCTGGCGC AAGTTCCGCA AGCAGCGCGT CGCGCTCGCG GCGGGGGCGT TCGTGCTGCT GCTCGTCGCC GTGGCGATCG TCGGCCCGCA CGTCGTGCCG TACGATCCGG AAAACTATTT CGACTACGAC GCGCTGAACG CGGGGCCGTC GGCCGCGCAC TGGTTCGGCG TCGATTCGCT CGGCCGCGAC ATCTTCAGCC GGATCGTCGC CGGCGCGCGG ATCTCGCTCG CCGCGGGCTT CTTCTCGGTC GCGCTCGGCG CGGCGATCGG CACGTTCTTC GGGCTGCTCG CCGGCTACTA CGAAGGCTGG TGGGACCGCG CGACGATGCG CGTCGCCGAC GTGCTGTTCG CGTTCCCAGG CATCCTGCTC GCGATCGGCG TGGTCGCGAT CCTCGGCAAC GGGATGATCA ACGTGATCTG CGCGGTCGCG GTGTTCAGCG TGCCCGCGTT CGCGCGGCTC GTGCGCGGCA ACACGCTCGC GCTCAAGCAG ATGACCTACG TCGAGGCCGC GCGCAGCATC GGCGCGTCCG ACCGGACGAT CATCATGCGG CACATCCTGC CCGGCACCGT GTCGTCGGTC GTCGTCTACT TCACGATGCG CATCGGCACC TCGATCATCA CGGCGGCGAG CCTGTCGTTC CTCGGCCTCG GCGCGCAGCC GCCGACGCCC GAGTGGGGCG CGATGCTCAA CGAGGCGCGC GCGGACATGG TCAACGCGCC GCACGTCGCG CTCTTTCCGA GCGTCGCGAT CTTTCTGACC GTGCTCGCGT TCAACCTGCT CGGCGACGGG CTGCGCGACG CGCTCGATCC GAAACTGGAG CGGCGCTGA
|
Protein sequence | MNATVSSPPS APASAGAPAA IRTPWSEFWR KFRKQRVALA AGAFVLLLVA VAIVGPHVVP YDPENYFDYD ALNAGPSAAH WFGVDSLGRD IFSRIVAGAR ISLAAGFFSV ALGAAIGTFF GLLAGYYEGW WDRATMRVAD VLFAFPGILL AIGVVAILGN GMINVICAVA VFSVPAFARL VRGNTLALKQ MTYVEAARSI GASDRTIIMR HILPGTVSSV VVYFTMRIGT SIITAASLSF LGLGAQPPTP EWGAMLNEAR ADMVNAPHVA LFPSVAIFLT VLAFNLLGDG LRDALDPKLE RR
|
| |