Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0381 |
Symbol | |
ID | 4677607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 394857 |
End bp | 396152 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639842908 |
Product | amino acid permease |
Protein accession | YP_989991 |
Protein GI | 121597422 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.364928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCC CCGCCGAGCC CGGCGCCACA ACCGTGCCGC ACCGTGCCGG CTCGCTCACG ATCCTCCAGG GCGCCGCGCT CTATATCGGC GCGGTGCTCG GCACCGGCGT CATCGCATTG CCCGCGCTCG CGGCGGAGGT CGCGGGCCCC GCGTCGCTGC TCGCGTGGGC GGCGCTCGTC ATGCTGTCGA TTCCGCTCGC CGCCACCTTC GCCGCGCTCG GCGCCCGCTA TCCGGACGCG GGCGGCGTCT CCACCTATGT GCGCAAAGCG TTCGGCCCGA AAGCGGCGGC CGTCGTCGGC TGGTGCTTCT ATTTCGCGGT GCCGGCCGGC GCCCCCGCCG CCGCGATGTT CGGCGGCGCC TACGTCGCCG CCGTCACGGG CGGCGCACAC GCGACGATGA TCGCATCGGC GGCCGTGCTG ATCGCGCTCG TCGCGGCCGC GAACGCGTTC GGCGTCACCG TGTCTGGCCG CATGCAGCTC GTGCTGTCCG CGCTGCTCGT CGCGCTGCTC GTGGCCGCCG TGCTCGCCTC CGCCCCGCAC GCGCGCGCCG CGAACCTGCA TCCGTTCGCG CCGCACGGCT GGCTCGCGGT CGGCGAGGCC GCCGCGCTGC TCGTCTGGAG CTTCGCCGGC TGGGAGGCGA TCACGCATCT CGCCGCCGAA TTCCGGCGCC CCGCGCGCGA TCTGCCGCGT TCGACGGGCA TCGCGGTCGC GGTGGTCGGG CTGCTGTACC TGTCGGTCGC GGCCGCGAGC GTGCTCGTGC TCGGTCCCGC CGCGGGCGAA TCCGGCGCGC CGCTCGCGGC GCTGATCGCG CGCGGGATCG GCGGCAACGC GCAACTGATC GCGACGGCGG CCGCGCTGCT GTTCACGCTC GGCACGATGA ACGCCTATTT CGCGGGCGCG GCGAAGCTCG GCGCCGCGCT CGGCCGCGAC GGCGCGCTGC CCCGCTGGTT CGCGCAGGGC AGCCAGACGG GCGGCGTGCC GCGGCGCAGC CTCGCCGTCG TCGCCGCGCT CGCCGGCTGC GCGCTCGTCG CGGCCGTCGC GACGGGCATG GGACCGAAGC CGCTCGTGCT CGCGACATCG GGCAATTTCG TGATGGTCTA CGTGCTCGGC GCGGCGGCGG CCACGAGGCT CCTGCCGCGC GGCGGGCTCG CGCATCGCGC ATCGATCGTC GCGCTGCTGT CGGCGCTCCT GCTGCTCGCG ACGACGGGCT GGTATCTGCT GTGGCCGCTG CTGCTGACCG CGTCGGCAAT CGGCTATCTT TTCATCACGG GCAGGCGGGC GGCGGCGAAG CGGTGA
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Protein sequence | MNAPAEPGAT TVPHRAGSLT ILQGAALYIG AVLGTGVIAL PALAAEVAGP ASLLAWAALV MLSIPLAATF AALGARYPDA GGVSTYVRKA FGPKAAAVVG WCFYFAVPAG APAAAMFGGA YVAAVTGGAH ATMIASAAVL IALVAAANAF GVTVSGRMQL VLSALLVALL VAAVLASAPH ARAANLHPFA PHGWLAVGEA AALLVWSFAG WEAITHLAAE FRRPARDLPR STGIAVAVVG LLYLSVAAAS VLVLGPAAGE SGAPLAALIA RGIGGNAQLI ATAAALLFTL GTMNAYFAGA AKLGAALGRD GALPRWFAQG SQTGGVPRRS LAVVAALAGC ALVAAVATGM GPKPLVLATS GNFVMVYVLG AAAATRLLPR GGLAHRASIV ALLSALLLLA TTGWYLLWPL LLTASAIGYL FITGRRAAAK R
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