| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0360 |
|---|
| Symbol | fliD-2 |
|---|
| ID | 4677894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 374511 |
|---|
| End bp | 376034 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639842888 |
|---|
| Product | flagellar hook-associated protein 2 |
|---|
| Protein accession | YP_989971 |
|---|
| Protein GI | 121596956 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.469357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCA CCCAGACGGG GACCACCTCG CAAAGCGATG TCTGGTCGCA AATTCAGGAC
GCCGCGCAGT CGCTGATCAA CGGCGCGACG GGCAAGACGT CGATGGACGT GAGCGGGCTC
GTATCGGTGC TCGTCAACGC GAAGACGGCG GGCCAGGCCG CGGAGATCAA GAACCAGGCG
GCCTGGAACA GCACGCAGAT CTCGGCGCTC GGCGCGCTCA AGCTGGCGCT CAGCAACCTG
AAGACGGGCG TCGAGCCGCT GTCGGACGGC ACGTTCGCGC AGAAATTCAC GTCGAAGGCG
AGCGGCAAGG GGCTCGGCGC GACGATGGAC AAAGGCACGG TGGCCGGCAG CTACCAGGTC
GAGGTCAAGC AGGTCGCGCG CTCGCAGACG CTCGTGTCCG CCGGTTTCGA TCCGAAGCAC
ACGCTCGGCT CCGGCACGCT CACGCTCAAG CTCGGCGATC GCTCGACGTC GATCGACATC
GACGCGACGA ACAACACCCC GGCCGGCATC GCGGCCGCGA TCAATTCGGC GAAGAACAAC
CCCGGCGTGA CCGCGACGGT CGTGACGGGC ACCGACGGCG CGCACCTCGT GCTGCGCTCG
ACCGCGTCGG GCAGCGCGAA CGTGATCAGC ATGAGCGTCT CGAACGTGAA GGACGACGCG
GGCCTGTCGG GGCTCGCGGT CCAGTCGACG GCGGACGACA AGGGCGGCAA GTCGGCGATC
ACGTCGGCGG GCGACGCCTG GAAGCAGAGC GATTTCGCGC AGGACGCGAT CGTCACGGTG
GGCGGCGTGA TCACCGCGCG CAGCGCGGAC AACGCGGTCA AGGGCGTGAT CGCGGGCGTG
ACGATCAATG TGACCGAGGA GGCGATCGGC GCGCCGCAGA CGCTGTTGAT CGCGCGCGAC
ATCGACGGTC AGGCGCGCGC GGTGACGAAC TTCGTCGATC TGTACAACTC GATGATCGGC
ACGATGGCGC AGCTCACGTC GTTCGACAAG ACGGCGAAGC CGGGGCAGCA GGGCGGCCCG
ATGATCGGCG ATTCGATGCT CAACGGCATT CGCAATTCGC TCGCGCACAT CGTCGGCGGC
GGCGTGCCGC ACGGCGAGAA CAAGCGCGCG TCGCTCGCGG CGCTCGGCAT CACGTTCGCG
CGGCCCGGCG ACAAGCAGCC GGAAGGTTCG CTGATCGTCG ACAAGGCCAA GCTGAACGAA
GCGCTGCAGA ACGATCCGCA GGCGGTCGAG GCGCTGTTCA ACAAGACGAA CGGCATCGGC
ACGCAGATCA CGAAGGCGCT CGATGTGCAT CTGCGCAAGG ACGGTTCGTT CGACGTGCGC
TCGAATGCGA TCGACCGCGA CATGAAGAGC ATCGCACAGC GCCAGGCGCG GCTCGAAACC
TACGCGTCGC AGCTGACCGC GCAGTACAAG GCGCAGTTCA CCGCGCTCGA CGCGCTGATG
GCGCGGATGC AGCAGAACAC CAACTATCTG ACGCAGTTGT TCGGCGGCGC GAACAGCTCG
GGCGCGCTCG CGAACAACAA GTGA
|
|---|
| Protein sequence | MAITQTGTTS QSDVWSQIQD AAQSLINGAT GKTSMDVSGL VSVLVNAKTA GQAAEIKNQA
AWNSTQISAL GALKLALSNL KTGVEPLSDG TFAQKFTSKA SGKGLGATMD KGTVAGSYQV
EVKQVARSQT LVSAGFDPKH TLGSGTLTLK LGDRSTSIDI DATNNTPAGI AAAINSAKNN
PGVTATVVTG TDGAHLVLRS TASGSANVIS MSVSNVKDDA GLSGLAVQST ADDKGGKSAI
TSAGDAWKQS DFAQDAIVTV GGVITARSAD NAVKGVIAGV TINVTEEAIG APQTLLIARD
IDGQARAVTN FVDLYNSMIG TMAQLTSFDK TAKPGQQGGP MIGDSMLNGI RNSLAHIVGG
GVPHGENKRA SLAALGITFA RPGDKQPEGS LIVDKAKLNE ALQNDPQAVE ALFNKTNGIG
TQITKALDVH LRKDGSFDVR SNAIDRDMKS IAQRQARLET YASQLTAQYK AQFTALDALM
ARMQQNTNYL TQLFGGANSS GALANNK
|
|---|
| |