Gene BMASAVP1_0331 details

Gene Information

• Locus tag: BMASAVP1_0331
• Symbol: bpsI
• ID: 4676958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 349087
• End bp: 349698
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639842859
• Product: autoinducer synthase BpsI
• Protein accession: YP_989942
• Protein GI: 121598144
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism; [T] Signal transduction mechanisms
• COG ID: [COG3916] N-acyl-L-homoserine lactone synthetase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAACTT TCGTTCATGG CGACGGGCGC CTGCCGAGCG ACTTGGCGGC TGATCTGGGC 
CTTTATCGGC ACGGAGTTTT CGTCGAGCAG CTCGGCTGGA AACTGCCGTC GGCAAGCGAA 
GGGTTCGAGC GGGATCAGTA CGATCGCGAC GATACCGTCT ATGTGTTCGC CCGCGACGAC 
GACGGGGAAA TCTGCGGCTG CGCCCGGCTG CTGCCGACGA CCCGCCCGTA TCTGCTGAAG 
GAACTGTTCC CGACGCTGGT CGCGCAAGAC ATGCCGTTGC CGCAATCCGC CGCCGTCTGG 
GAATTGTCGC GCTTCGCCGC GAACGCCGAG GATCCGGCCG GGGGCGGCAA CCCGGCCTGG 
GCGGTGCGGC CGATGCTCGC CGCCGTCGTC GAGTGCGCCG CGCGGCTTGG CGCGAAGCAA 
CTGATCGGCG TGACGTTTCT GAGCATGGAG CGCCTGTTCC GCCGGATCGG CGTGCACGCG 
CACCGGGCGG GGCCCGCGCA GCAGATCGAC GGGCGCATGG TCGTCGCGTG CTGGATCGAC 
CTCGACGCGC AAACGCTCGC CGCGCTCGAT CTCGACCCGC TGCTGTGCGC GCCGCCCGCC 
GAAGCCGCCT GA 

 

Protein sequence

MRTFVHGDGR LPSDLAADLG LYRHGVFVEQ LGWKLPSASE GFERDQYDRD DTVYVFARDD 
DGEICGCARL LPTTRPYLLK ELFPTLVAQD MPLPQSAAVW ELSRFAANAE DPAGGGNPAW 
AVRPMLAAVV ECAARLGAKQ LIGVTFLSME RLFRRIGVHA HRAGPAQQID GRMVVACWID 
LDAQTLAALD LDPLLCAPPA EAA