Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0314 |
Symbol | |
ID | 4677878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 334951 |
End bp | 335748 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639842842 |
Product | short chain dehydrogenase |
Protein accession | YP_989925 |
Protein GI | 121596502 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.265928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAGA TCGACTTGAG CGGGCAGGTC GCCGTGGTGA CGGGCGGCTC GTCCGGCATC GGCTACGCGA GCGCCGAGCT CTTCCTGCGC GCGGGCGCGT CGGTCGCGAT ATGCGGCCGC GGCGATGAGC GGCTCGCGAG CGCGCACGCG CGGCTCGTGC GGCAGTTCCC GCGCGAGCGC GTGCTTGCCG TGCGTTGCGA CGTGCTCGAC GAAGCCGACG TGACCGCGTT CGCGCAGGCC GTTGCCGAGC GCTTCGGCGG CGCGGACATG CTCGTCAACA ACGCGGGCCA GGGCCGCGTG TCGACGTTCG CGGACACGAC GGACGACGCG TGGCGCGACG AACTCGAACT GAAATACTTC AGCATCATCC GCCCGACGCG CGCGTTCCTG CCGCTGCTGC GCGCGTCGAG TGCGCCGAGC ATCACCTGCG TGAATTCGCT GCTCGCGCTG CAGCCCGAGC CGCACATGGT CGCGACTTCG TCGGCGCGCG CCGGCACGCT GAGCCTCGTC AAATCGCTCG CGACCGAGCT CGCGCCCGAG CGCGTCCGCG TCAATTCGAT CCTGATCGGC ATCGTCGAAT CGGGTCAATG GCGGCGGCGC TACGACGCGC AGGCCGCGCC GGGCGAATCG TGGGAAGCGT GGACAGCCGC GCTCGCCGCG AAGAAAAACA TTCCGCTTGC GCGCTTCGGC CGGCCCGACG AGGCCGCGTG GGCGCTCTTT TATCTCGCAA CGAATCTGTC GTCTTACACG ACGGGCAGCC ATATCGACGT ATCAGGAGGC TTTGCACGCC ATGTCTAA
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Protein sequence | MIQIDLSGQV AVVTGGSSGI GYASAELFLR AGASVAICGR GDERLASAHA RLVRQFPRER VLAVRCDVLD EADVTAFAQA VAERFGGADM LVNNAGQGRV STFADTTDDA WRDELELKYF SIIRPTRAFL PLLRASSAPS ITCVNSLLAL QPEPHMVATS SARAGTLSLV KSLATELAPE RVRVNSILIG IVESGQWRRR YDAQAAPGES WEAWTAALAA KKNIPLARFG RPDEAAWALF YLATNLSSYT TGSHIDVSGG FARHV
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