Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0263 |
Symbol | |
ID | 4677951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | - |
Start bp | 289497 |
End bp | 290651 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639842791 |
Product | putative outer membrane porin |
Protein accession | YP_989874 |
Protein GI | 121597890 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC ACGTCATTTC CGCAGCCGCA TTGCTGGCCT TCGCCGCGCC GGTTTTCGCC CAAAGCAGCG TCACGCTGTA CGGCGTGATC GACGAAGGCT TCAACTACAC GAGCAACGTG AACGTCAACG GCGTCGGCAA GAGCAACTAC CAGCTCGCGA GCGGTTTCGT GCAGGGCAGC CGCTGGGGCC TGCGCGGCTC GGAAGACCTG GGCGGCGGCC TGAAAGCCAT CTTCACGCTC GAAAACGGTT TCGACGTGAA CAACGGCCGG CTCGGCCAGG GCGGCCGGAT GTTCGGCCGC CAGGCGTTCG TCGGCCTGTC GCACGCGCAA TACGGCTCGC TCACGCTCGG CCGCCAGTAC GATTCGCTCG TCGACTACCT CGCGCCGTTG ACCGCGAACG GCAACTGGGG CGGCACGCTG TTCTCGCATC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTGAA CAACACGGTC AAGTACGCGA GCCCGGACTG GAACGGTCTG CAAGTCGGCG GCACGTACAG CTTCAGCAAC GCGACGGGCT TCTCGAACAA CCGCCAGTAC AGCATCGGCG CCGCGTACAC GCTGGGCGGC CTGCAACTCG CGGCCGCGTA CCTGCAGGCG AACAACCCGG GCAAGACGGC GGGCGGCGCG ATCGCCGACA ACGACGCGAA CTTCACGGCG GACCGCCTGC GCATCTTCGG CGGCGGCGTC AACTACACGT TCGGCCCGGC GACGGTCGGT TTCGTCTACA CGAAGACCGA CGTGAAGAAC CCGGTCTCGA CGGTCTATCT GCCGACGGCG ACGTTCGCGG GCCTCGGCCT GAGCGCGACG AAGTTCCAGA ACTTCGAAAT CAACGGCAAA TACCAGCTGA CGCCGGCGCT CTTCATCGGC GCGCAGTACG TGTACACGGA CGGCAAGTTC GATGCGGCCG CGGGCAGCGT CAAGCCGAAG TACCACACGG TCGGCCTGAT GGCGGACTAC AACCTGTCGA AGCGCACCGA CGTCTATCTG CAGGGCGCGT ACCAGAAGGT CGCGGGCGAC AAGACGGGCA CGATCGCGGA TGGCGGCTAC GTCGTCGGGA CGGACGGCCC CTCGGCGTCG GCGAACCAGT TCGCGGTTCG CGCGGCGATC CGTCACAAGT TCTGA
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Protein sequence | MKKHVISAAA LLAFAAPVFA QSSVTLYGVI DEGFNYTSNV NVNGVGKSNY QLASGFVQGS RWGLRGSEDL GGGLKAIFTL ENGFDVNNGR LGQGGRMFGR QAFVGLSHAQ YGSLTLGRQY DSLVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASPDWNGL QVGGTYSFSN ATGFSNNRQY SIGAAYTLGG LQLAAAYLQA NNPGKTAGGA IADNDANFTA DRLRIFGGGV NYTFGPATVG FVYTKTDVKN PVSTVYLPTA TFAGLGLSAT KFQNFEINGK YQLTPALFIG AQYVYTDGKF DAAAGSVKPK YHTVGLMADY NLSKRTDVYL QGAYQKVAGD KTGTIADGGY VVGTDGPSAS ANQFAVRAAI RHKF
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