| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0247 |
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| Symbol | |
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| ID | 4677304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 277244 |
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| End bp | 278845 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639842775 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_989858 |
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| Protein GI | 121596798 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.279993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCT CGATGCCCAA GCTCGTCGCG GCGCTCGCCG CCGCTTCCGC GTTCGCGGCC
GTCCCGGCCC GCGAAGCGCA CGCGGCGCCG CCGAAAGACC TGTTCGTGAT GGCCACGCTG
CTCGACGAGT TCATCTCGCT CGATCCGGGT GAAATCTACG AGCTCGTGCC GGAGGAATAC
GTCGCGAATA CATACGACCG GCTGGTGCGC GTCGATCTCG CCGATCCGTC GAAATTCAAC
GGCGACGTCG CGCAATCGTG GAGCGTGAGT CCCGACGGCC TCACGTTCAC GTTCAAGCTG
CGCGCGGGCC TCGCGTTCCA TTCGGGCAAT CCGCTCACGG CCGACGACGT CGCGTGGTCG
CTCCAGCGCG CGGCGCTGCT CGACAAGGGG CCGGCCGCGG TGCTCGCGGG CATCGGCCTC
ACGAAGGCGA ACGCGCTCGC GAACGTGAAA AAGCTCGACG CGCTGACGGT ATCCGTCACG
ACCGACCGCA AGTACGCGCC GAGCTTCGTG CTGAACGTGC TCGGCTCGTG GCCCGCGTCG
ATCGTCGACA AGAAGCTGCT GCTGTCGCAC CAGCAGGGCG ACGATTTCGG CAATGGCTGG
CTGAAGACGC ACGAGGCCGG CTCGGGCGCC TACCAGCTCG TCAAGTGGAC GGCGGGCGAC
AGCATCGTGC TGCAGCGCTA CGACCGCTAC CGGCTGCCGC TCGCGATGAA GCGGATCGTG
CTGCGCCACG TGCCCGAGGC GGCGAGCCAG CGGCTGCTGC TCGAAAGCGG CGATGTCGAC
GCGGCGCGCG ACCTGAGCCC CGACGATCTC GCGGCCGTCG CGAACAGCGG CAAGGCGAAG
GTGACGCCGT CGCCGCAGGC GACGCTGCTG TACCTCGGCC TCAACACGAA GAACCCGACG
CTCGCGAAAC CGGAGGTTCA GCAGGCGCTG AAATGGCTCG TCGATTACGA CGGCATCCAG
CGCCACGTCG TGAAAACGAC CTACCAGGTC CATCAGACGT TCATGCCGGA GGGCTTGCTC
GGCGCGCTGA ACGCGAATCC GTACCGGCTC GACGTCGCGA AGGCGAAGGC GCTGCTCGCG
AAGGCCGGCG TGCCGAACGG CTTCACGGTG ACGATGGACG TGCGCAACGA TTACCCGTAC
ACCGAGATCG CGCAGGCGGT GCAGGCGAAC TTCGCGCAGG CGGGCGTCAA GGTGCAGCTG
ATTCCCGGCG ACAACAAGCA GACGCTCGCG AAGTACCGTG CGCGCCAGCA CGACATCTAC
ATCGGCGAAT GGTCGGCCGA TTACATCGAT CCGCACAGCA ATGCGCAGGG CTTCGCATGG
AACCCGGATA ATTCGGATCA GTCCAGCTAC AAGATGCTCG CGTGGCGCAA CGCCTGGAAC
ATCCCGCGAC TGACCGCGCA AACGGACGCG GCGCTCGCGG AGCCTTCCGC CGCGAAGCGC
GCGCAGTCAT ATCAGGCGAT GCAAAAGGAA GTGCTCGCGA AATCGCCGTT CGTGATCCTG
TTCGAGAAAG TCGCGCAGGT CGCGACGCGG CCCGGCGTGA GCGGCCTCGA AGTCGGCCCG
ATCAACGATC TCGTTTCATA TCGCAATCTG AAGAAGCAGT GA
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| Protein sequence | MTLSMPKLVA ALAAASAFAA VPAREAHAAP PKDLFVMATL LDEFISLDPG EIYELVPEEY
VANTYDRLVR VDLADPSKFN GDVAQSWSVS PDGLTFTFKL RAGLAFHSGN PLTADDVAWS
LQRAALLDKG PAAVLAGIGL TKANALANVK KLDALTVSVT TDRKYAPSFV LNVLGSWPAS
IVDKKLLLSH QQGDDFGNGW LKTHEAGSGA YQLVKWTAGD SIVLQRYDRY RLPLAMKRIV
LRHVPEAASQ RLLLESGDVD AARDLSPDDL AAVANSGKAK VTPSPQATLL YLGLNTKNPT
LAKPEVQQAL KWLVDYDGIQ RHVVKTTYQV HQTFMPEGLL GALNANPYRL DVAKAKALLA
KAGVPNGFTV TMDVRNDYPY TEIAQAVQAN FAQAGVKVQL IPGDNKQTLA KYRARQHDIY
IGEWSADYID PHSNAQGFAW NPDNSDQSSY KMLAWRNAWN IPRLTAQTDA ALAEPSAAKR
AQSYQAMQKE VLAKSPFVIL FEKVAQVATR PGVSGLEVGP INDLVSYRNL KKQ
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