| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0145 |
|---|
| Symbol | |
|---|
| ID | 4677716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 136167 |
|---|
| End bp | 136991 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 639842676 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_989760 |
|---|
| Protein GI | 121597493 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.261228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ATCCCGATCT TTGCGTTGCA CCGGAATCCG ACGAGCCGGG GCTCCTCGCG
CTGTCGGCGT TCGTCGACGG CGAACTGCCG GACGCGCAGA GCCGCGCGAT GGCCAGGCGG
CTCGCGTCCG ATCCGCGCGC GGCCGGCATC GCCGCGCACT ATCGCGCGCA GCGTGCGGCG
CTGCGCGCGC TGTTCGCCGA TCCTGTCGCG CCGCGCCACG GCCCGTGCGT CGCGTGGCCG
GTGCGCACGC CGTGGTGGCG GCGCGCGGCG TTCGCGGGCG GCGCGCTGGC GGCGGGCGTC
GCGCTCGGCT GGCTCGGCGG CGCGCTCGCG CCGCGGTTCG CGCCGTCCGC CGCGCTGCAA
TGGGTCGCGC CCGCGGCCGC GCAACGCGCG TTCGCGCGCG ACGCCGATCT CGCCTACGCG
CTCTACGCGC CCGATGCGCG GCACCCGGTC GAAATCGCCG TCGGCCGCGA CGGCGCGCCG
CTCGCGTGGC TGTCGGCGCG CGTCGGCCGC CGGATCGCCG CGCCGTCGCT CCGCGAGTAC
GGCTTCGCGC TGCTCGGCGC GCGGCTGCTG CCCGGCGCGG GCGGCCCCGC CGCGCAATTC
ATGTACGAAA ACGCGGCAGG CGAGCGGCTC GCGCTGTACG TGAGCGCGTC CGCGCAGCGC
GAGGCGGCGG TGCGGCCGTG GCGCGACGGC GGGCGGCACA CCTTCTACTG GGTCAGCGAG
CGCACCGCGT ACGCGCTCTC CGGCCAGCTC GACGAAGGCC GGCTGCGCAC GATCGCGGCC
GACGTCTGCA GCGAGCTCGG CGGCCATCCG CAGCGGTGGC GATAG
|
|---|
| Protein sequence | MSDDPDLCVA PESDEPGLLA LSAFVDGELP DAQSRAMARR LASDPRAAGI AAHYRAQRAA
LRALFADPVA PRHGPCVAWP VRTPWWRRAA FAGGALAAGV ALGWLGGALA PRFAPSAALQ
WVAPAAAQRA FARDADLAYA LYAPDARHPV EIAVGRDGAP LAWLSARVGR RIAAPSLREY
GFALLGARLL PGAGGPAAQF MYENAAGERL ALYVSASAQR EAAVRPWRDG GRHTFYWVSE
RTAYALSGQL DEGRLRTIAA DVCSELGGHP QRWR
|
|---|
| |