Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_0036 |
Symbol | toxC |
ID | 4677892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 34832 |
End bp | 36529 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639842569 |
Product | WD domain-containing protein |
Protein accession | YP_989653 |
Protein GI | 121597978 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTC ACCGCGCACC GATCAGCGGG ATTGCCGCGC ACCGCGACCA GTACGTCCTG ACGGCCGGTT ACGACAACCA GGTCATCCTG TGGGACGCGA AGACCCAGCG TCCGCTCGCC CGCGCGATGC ACGACCACCT CGCGAACCAG GGCGCGTTCT CGCCCGACGG CGCGTACGTC GTCACGTCGT CGTCCGATTA CAGCGCCCGC CTCTGGACCG TGCCCGATCT GCGGCTCGTC GCCGTGTTCG CCGATCAGGA GGACGACGTC GAGATGAGCG TGTTCCATCC GGACAAGCCG CTCGTCGCGA CCGCGTCGCG CGATCACCGC GTGCGCGTCT ACGATTTCGG CGGCAAGCTG CTGCACACGT TCAGCGGCCA TACGGCCGAC GTGATTTCCG TCGAATGGAT GCGCGGCGCC GACGAGATCG TCTCGTCGAG CGACGACGGC ACGATCAAGC GCTGGTCGCT CGCGAACAAC GGCCTCGTCG CCGACATCGA TCTCGACGGC ATCGAGACCG ACACGATCGC GATCGCCGCC GACGGGCGCA TTTTCGCGGG CAACGACGAG GGCGAGATCA TCTCGATCGG CGTCGACGGC GCGCGCGCGA CGATCGCCGC GCACGACGCG GGCGTGAAGC GCCTCGTGCT CGACGGCGAG CGCGGCCTGC TCGTGTCGCT GTCGTACGAC CGCACGATGC GGCTCTGGAA GGTGGGCGCG GCGGGCGAGC CGCGGGCGCT CGGCGGCGCG GCGCTGCCGC CCGAGGTGTG GCCGCGCTCG TGCTCGTTCG AGGGCGACGA GCACATCGTG TTCTCGACGT TCCATTCGAG CTACCGCCGC TACAACTGGA AGACCGAGCG CTGGGACGCG GCCGAGCTGC CGCCGACGCA CGGCGTGAAC GCGGTGCAGC CCGTCGACGG CCATCTGTGG ACGATCGGCG ACGCGGGCAT CGTGCGGGTC GACCAGCGCG AGCATGCGCG CACGGGCAGC CTGTGCAACT TCCTCGCGCC GGCGGGCGAG CTGATCCTGA CGGGCGGCCA GCTCGGCAAG GTATTCGACG CGCGCAGCGG CCGCGAGCTG CATCAGCACC GCTCGCCGCT GAACTGCGGC GTGGCGTTCG CGCGCGACGG CGCGGCGCAT GCGGTGATCG GCACGTATAC GGGCGAAGGC ATCGTGCTGC GGATCGACGG CACGCGGGCG ACGCACGTGG CCGACCTGCC GCTGCACGCG AACGCCGTCA AGGGCATCGC GATCTCGGGC GATCTGATCT TCTCGGTCGC GGCCGACGCG TCGGCCACCT GGTATCGCGC GTCGACGCTC GAGCCGGCGT TCGAGCTCAA GCGCGCGCAC GACAAGATCG CGAACGGCTG CGCGGGCCTC GGCGACGGCT ACTTCGCGTC GGTGAGCCGC GATCTGAAGC TGCGGATCTG GTCGCCGGAC TCTCACGCGG AGGTGATCGC GACACCCCAC ACGCATTCGA TCAAGTGCGT CGCGGCGAGC GCCGACGGCC GCTATGTCGC CACCGGCAGC TACAACGGCC GCGTCGCCGT CTACGACCGC GTCGAGACGC GCTGGGCGCT CGACGCGCGC GTGACGACGG CGGGCGTATC GTCGCTCGCG TACGATCCGG CCGCGCGCGC GTTCCTCGCG AGCTCGTACG ACGGCAACGT ATACCGCATT CCGCTGGAGC GCGCATGA
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Protein sequence | MITHRAPISG IAAHRDQYVL TAGYDNQVIL WDAKTQRPLA RAMHDHLANQ GAFSPDGAYV VTSSSDYSAR LWTVPDLRLV AVFADQEDDV EMSVFHPDKP LVATASRDHR VRVYDFGGKL LHTFSGHTAD VISVEWMRGA DEIVSSSDDG TIKRWSLANN GLVADIDLDG IETDTIAIAA DGRIFAGNDE GEIISIGVDG ARATIAAHDA GVKRLVLDGE RGLLVSLSYD RTMRLWKVGA AGEPRALGGA ALPPEVWPRS CSFEGDEHIV FSTFHSSYRR YNWKTERWDA AELPPTHGVN AVQPVDGHLW TIGDAGIVRV DQREHARTGS LCNFLAPAGE LILTGGQLGK VFDARSGREL HQHRSPLNCG VAFARDGAAH AVIGTYTGEG IVLRIDGTRA THVADLPLHA NAVKGIAISG DLIFSVAADA SATWYRASTL EPAFELKRAH DKIANGCAGL GDGYFASVSR DLKLRIWSPD SHAEVIATPH THSIKCVAAS ADGRYVATGS YNGRVAVYDR VETRWALDAR VTTAGVSSLA YDPAARAFLA SSYDGNVYRI PLERA
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