| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0010 |
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| Symbol | irlR |
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| ID | 4678313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | - |
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| Start bp | 9375 |
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| End bp | 10064 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639842543 |
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| Product | transcriptional activator IrlR |
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| Protein accession | YP_989627 |
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| Protein GI | 121596825 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.121051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATAC TGATCGTGGA AGACGAGCCG AAGACCGGCA TGTATCTGCG CAAGGGGCTG
ACCGAAGCGG GCTTCATCGC GGACTGGGTC GAGGACGGCG TGACGGGCCT GCATCAGGCC
GAGACCGAGG AGTACGACCT GATCATCCTC GACGTGATGC TGCCCGGCCA CGACGGCTGG
ACGGTGCTCG AGCGGCTGCG CCGCGCGCAC TCGACGCCCG TGCTGTTCCT GACCGCGCGC
GACGACGTCG GCGACCGCGT GAAGGGGCTC GAGCTCGGCG CGGACGATTA CGTCGTCAAG
CCGTTCGATT TCGTCGAGCT GGTCGCGCGC GTGCGCTCGA TCCTGCGCCG CGGGCAGGCG
CGCGAATCGA CGGTCCTGCG GATCGCCGAT CTGGAGCTCG ACCTGACGCG GCGCAAGGCC
ACGCGCCAGG GCGACGTCGT GCTGCTGACC GCGAAGGAAT TCGCGCTGCT GTGGCTGCTG
ATGCGCCGCG AGGGCGAGAT CCTGCCGCGC GCGACGATCG CCTCGCAGGT GTGGGACATG
AATTTCAACA GCGACACGAA CGTCGTCGAC GCGGCGATCC GCCGGCTGCG CTCGAAGATC
GACGACGCGT ACGAGCCGAA GCTGATCCAC ACGGTGCGCG GGATGGGCTA CGTGCTCGAA
GTCAGAAGCG CGAGCGCGCC GAGCCGATGA
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| Protein sequence | MRILIVEDEP KTGMYLRKGL TEAGFIADWV EDGVTGLHQA ETEEYDLIIL DVMLPGHDGW
TVLERLRRAH STPVLFLTAR DDVGDRVKGL ELGADDYVVK PFDFVELVAR VRSILRRGQA
RESTVLRIAD LELDLTRRKA TRQGDVVLLT AKEFALLWLL MRREGEILPR ATIASQVWDM
NFNSDTNVVD AAIRRLRSKI DDAYEPKLIH TVRGMGYVLE VRSASAPSR
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