Gene BMAA1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1811 
SymbolkduD 
ID3087630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1977968 
End bp1978738 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID637565687 
Productshort chain dehydrogenase 
Protein accessionYP_106362 
Protein GI53716283 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.780661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATC TCTGGGATAG GGCGTTCGAC CTGACGGGGC GCGTCGCACT CGTGACGGGC 
GGCGCGGCGG GCATCGGCCA TGCGTGCGCG CGGCTGCTCG CGCAGCGCGG CGCGAGCGTC
GCGCTCGTCG ATCGGCACCC CGAAACGGCG GGGATCGCCG CGACGCTCGA GGGCGGCGCC
GCGCGCCACA GCGGGATGTC GCTCGACCTG CGCGACTGCT CCGCCGCGCA GGCGGGCGTC
GCGCTCGCCG CGTCGCGCTT CGGCGGCGTC GACATGCTCG TCAACAGCGC GGGCGTCGCG
CTGCTCGACA AGGCGCTCGA CGTCGGCGAA GCCGCGTGGG ACGCGACGAT GGCGATCAAC
GTGAAGGCGT CGTTCTTCGT CGCGCAGGCG GCCGCGCGGC AGATGATCGC GGGTGCGCGC
GGCGGGCGGA TCGTCAATCT CGCGTCGCAG GCGAGCGTTG TCGGGCTCGA GCGGCATGCC
GCGTATTGCG CGAGCAAGGC CGCGATCGTC GGGATGACGA AGGCGCTCGC GCTCGAATGG
GCGCCGCACG GCATTACCGT CAACGCGGTG TCGCCGACGA TCGTCGAAAC GGCGCTCGGC
AAGCAGGCAT GGGCGGGCGA GGCCGGCGAG CGCGCGAAGC GCGAGATTCC GGCCGGCCGC
TTCGCGCAGC CGGACGAGAT CGCCGCGCTC GTGCTGTATC TGCTGAGCGA CGCGGCCGCG
ATGATGACGG GCGAGAACGT CGTCATCGAC GGCGGCTACA CCGTGCGCTG A
 
Protein sequence
MTNLWDRAFD LTGRVALVTG GAAGIGHACA RLLAQRGASV ALVDRHPETA GIAATLEGGA 
ARHSGMSLDL RDCSAAQAGV ALAASRFGGV DMLVNSAGVA LLDKALDVGE AAWDATMAIN
VKASFFVAQA AARQMIAGAR GGRIVNLASQ ASVVGLERHA AYCASKAAIV GMTKALALEW
APHGITVNAV SPTIVETALG KQAWAGEAGE RAKREIPAGR FAQPDEIAAL VLYLLSDAAA
MMTGENVVID GGYTVR