Gene BMAA1518.1 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1518.1 
Symbol 
ID3086707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1648675 
End bp1649346 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID637565404 
ProductDNA-binding response regulator 
Protein accessionYP_106110 
Protein GI53717636 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000399536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGTAG AGAGAAAGTG TGAAAGGGTG CTCGTCGTCG ACAGCCATCC GATCGTGCGC 
GACGGCATCG AGGTCGTGCT CGGCAAGGCG TATGCGGGAA TCGACGTGGA CGGCGCGGCC
GACATGGCCG AGGCGAGCGA CCGGTGCGGT CGCGATCGTC CGGATCTCGT GCTGTTGGAC
GTGATGCTGC CGGGCGAGGA TCCGCTGCCG GCGATGGGCG AGATCCTGCG CGCGCACCCG
GGCCTGCGGT TCGTCGTCTT CACCGCGCTC GGCTCGGAGG CGCGCGCGGC GGACGCGATC
CGCTTCGGCG CCTCCGGCTA TCTGCTGAAG TGGTGCAGCC CGGACGGCAT CGTGCAGGCG
ATTCGCCGCG TGATGGCGGG GCGCGTTCAC ATCGATCCGT CGCTCGACGA GGCGAGGGTG
GCGTCGGCGG CCGGCGGCCG CACGCTCGCC TCGCCCGTCG ACGAGCTCAC GCGGCGCGAG
AAGCAGGTGC TCAAGCTGAT CGCCGACGGG ATGCGCAATC GCGAAATCGC GTCGCTGCTG
AACATCAGCC CGAAGACGGT CGATTGTCAT CGGCAGCGGC TGATGCAGAA GCTCGGCGCG
CGCAACGTCG CGACCGTGAT CCACTGGGCG TATCGATACG GATATGCGAA CGCGTGCGCG
CCGGCGATGT AG
 
Protein sequence
MVVERKCERV LVVDSHPIVR DGIEVVLGKA YAGIDVDGAA DMAEASDRCG RDRPDLVLLD 
VMLPGEDPLP AMGEILRAHP GLRFVVFTAL GSEARAADAI RFGASGYLLK WCSPDGIVQA
IRRVMAGRVH IDPSLDEARV ASAAGGRTLA SPVDELTRRE KQVLKLIADG MRNREIASLL
NISPKTVDCH RQRLMQKLGA RNVATVIHWA YRYGYANACA PAM