| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1421 |
|---|
| Symbol | |
|---|
| ID | 3087706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 1526094 |
|---|
| End bp | 1527653 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637565308 |
|---|
| Product | amino acid permease |
|---|
| Protein accession | YP_106027 |
|---|
| Protein GI | 53716981 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0140485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC AAGGCAATGC CCAGCGAACC GCGCCGCTCG CGCGGCCCGC GCCCACCGAC
GCCGGCCACG GCAAGTTCAA GAAACAGCTG TCGCTCACCG ATCTGACGTT CATCGGCCTC
GGCGCGATCT TCGGCTCGGG GTGGCTGTTC GCCGCGAGCC ACGTATCGAC GATCGCGGGC
CCGGCCGGCA TCCTCTCGTG GCTGCTCGGC GGCTTCGCGG TGCTGCTGCT CGGCATCGTC
TACTGCGAGC TCGGCGCGGC GCTGCCGCGC GCGGGCGGCG TCGTCCGCTA TCCGGTGTTC
TCGCACGGCC CGCTGCTCGG CTACCTGATG GGCGCGATCA CGCTGATCGC GTTCTCGAGC
CTGATCGCGA TCGAAGTCGT CGCCGCGCGC CAGTATGCGG CCGCGTGGTT TGCGGGCCTG
ACCGTCGAGG GCTCGGGCAA TCCGACGACG CTCGGCTGGC TCGTGCAGGC GGCGCTGCTC
TGTTTCTTCT TCTACCTGAA CTATTCGAGC GTGAAGACGT TCGCGAAGGC GAACAACGTC
ATCAGCGTGT TCAAGTTCGT CGTGCCGCTC GCGGTGATCG TCGTGCTGTT CGCGTTCTTC
AAGCCCGCGA ACCTCACCCT GCACGGCTTC GCGCCGTTCG GCATGCCCGG CGTCGAGATG
GCCGTGTCCG CGGGCGGCAT CATCTTCGCG TATCTCGGCC TCACGCCGAT CGTCTCGGTC
GCGAGCGAGG TGCGCGACCC GCAGCGCACG ATTCCGATCG CGCTGATCCT GTCGATCGTG
CTCTCGACGC TGATCTACGT GCTGCTGCAG CTCGCGTTCC TCGGCGGCAT CCCGAGCGCG
ATGCTCGCGG GCGGCTGGCT CGCGTACATG GTCGTCGCCG ACGCGATGAT CTCGCCGTCC
GGCTGCGGCA ATATCTACAT GAACGCGACG CCGCGCGTCG TCTACGGCTG GGCGAAGACG
GGCACGTTCT TCAAGGTGTT CGCGCGCGTC GACGAGGCCT CCGGCATTCC GCGCGCGGGG
CTGTGGCTCA CGTTCGCGCT GGCGCTCTTC TGGACGCTGC CTTTCCCGTC GTGGGAGGCG
CTCATCAACA CCGTGTCGGC CGCGCTCGTG CTGAGCTACG CGGTCGCGCC GGTATCGGTC
GCCGCGCTGC GCCGCACCGC GCCCGGGCTG CCGCGGCCGT TTCGCGCGAG CGCGTTCGCG
CTCACCGGCC CCGCTTCGTT CGTGATCGCC GCGCTGATCG TCTACTGGTC CGGCTGGCGC
ACCGTGTCGT GGCTGCTCGG GCTGCAGATC GCGATGTTCG CCGTCTATCT CGCGTGCCGC
CGCCGGGTGC CCACCGCGCA TCTGAGCCTC GCCGAGCAGG TGCGCTCGTG CGCGTGGCTG
ATCGCGTTCT ACGCGCTGAT GATCGTCGCG TCGTATTTCG GCGGCTTCGG CGGCACCGGG
CAGCTCGCGC ACCCGTACGA CACGTTCGCC GTCGCGGCCG TCGCGCTCGT CATCTACTAC
TGGGGCGCGC ATACCGGCGT GCCGTCCGCG AAGCTGCAGC TCGACGACGA CGAGAACTGA
|
|---|
| Protein sequence | MPAQGNAQRT APLARPAPTD AGHGKFKKQL SLTDLTFIGL GAIFGSGWLF AASHVSTIAG
PAGILSWLLG GFAVLLLGIV YCELGAALPR AGGVVRYPVF SHGPLLGYLM GAITLIAFSS
LIAIEVVAAR QYAAAWFAGL TVEGSGNPTT LGWLVQAALL CFFFYLNYSS VKTFAKANNV
ISVFKFVVPL AVIVVLFAFF KPANLTLHGF APFGMPGVEM AVSAGGIIFA YLGLTPIVSV
ASEVRDPQRT IPIALILSIV LSTLIYVLLQ LAFLGGIPSA MLAGGWLAYM VVADAMISPS
GCGNIYMNAT PRVVYGWAKT GTFFKVFARV DEASGIPRAG LWLTFALALF WTLPFPSWEA
LINTVSAALV LSYAVAPVSV AALRRTAPGL PRPFRASAFA LTGPASFVIA ALIVYWSGWR
TVSWLLGLQI AMFAVYLACR RRVPTAHLSL AEQVRSCAWL IAFYALMIVA SYFGGFGGTG
QLAHPYDTFA VAAVALVIYY WGAHTGVPSA KLQLDDDEN
|
|---|
| |