Gene BMAA1182 details

Gene Information

• Locus tag: BMAA1182
• ID: 3086608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: -
• Start bp: 1234478
• End bp: 1234987
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637565080
• Product: ECF subfamily RNA polymerase sigma factor
• Protein accession: YP_105829
• Protein GI: 53717021
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.324595
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGCCA ACACTTTGCG TCTGCAGCGG GAGATCGCTG CGCTCTATAC CGGTCATCGC 
GGCTGGCTGC ACGGCTGGCT GTCGAAGAAG CTCGGCTGCG GCGAGCGCGC GGCCGATCTG 
GTTCACGACA CGTTCATCCG CCTGCTCGCA CGCGACGAGC CGATCGACGC GGCCGAGCCG 
CGCGCGTTCC TGACGACCGT CGCGCAGCAC GTGCTGTACA ACCACTGGCG GCGCGAGCGG 
CTCGAGCGCG CGTATCTCGA CGCGCTCGCG CAATGGCCGG AGGCGGTCGC GCCGTCGCCG 
GAGACACGCG CCGTCCTGTT CGAGACGCTC GTCGAGGTCG ACCGGATGCT CGACGGGCTG 
CCCGCCGTCG TTCGCCGCGC GTTCCTGCTC GCGCAGCTCG ACGGCATGAC GCACGCGCAG 
ATCGCGGCCG AGCTGCGCGT GTCGCTCGCG ACCGTCAAGC GCTACCTGGT GAAAGCGGGC 
GCGCAGTGCT ACTTCGCGAT CGCCGCATGA 

 

Protein sequence

MPANTLRLQR EIAALYTGHR GWLHGWLSKK LGCGERAADL VHDTFIRLLA RDEPIDAAEP 
RAFLTTVAQH VLYNHWRRER LERAYLDALA QWPEAVAPSP ETRAVLFETL VEVDRMLDGL 
PAVVRRAFLL AQLDGMTHAQ IAAELRVSLA TVKRYLVKAG AQCYFAIAA