Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA0933 |
Symbol | |
ID | 3087032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 951311 |
End bp | 953326 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637564836 |
Product | putative cysteine desulfurase |
Protein accession | YP_105618 |
Protein GI | 53716574 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTATCC CGACACCTAC CGTTGATTCC GCCATGAGCG CCGCACCCGT CGCGCTGCCG GACGCGGCGC CGCCCGCCGG GCTGCCCGAT CCGGCGACGC TTGCGCGCCT TGCGTCGGAG TTTCTCGCCG CGCTGCCCGG GCAGCCCGCC GCGCCGAATG CCGGCGCGGG CAGCGGCGCC GTCGGCGGTG TGCCGTCGGC GTTGCCGGCC GCCGCGCCGA TGCTTGCGTC GGTTTCGAAT CCCGCGCCGC CGGGCTCGCC GCTTGCCGGG CCCGGCGGCA CCGGCACGGG CGTGCCGGGT ATCGGGGTGC CGCCGGGCAA GGTGCCCGGC GCGAACCTCG TACCCGCGCC GACACATGTG CTGTCGCTCG GCAACCGCAC GCCCGCGCTC GTTGGGCACG CGGCCGCGCA AAACGGATGG CCGGACAGCG CGGTTGCAAT CGCGCCGGCG CTCGAGCCGC GCGCGGGCGG CGTCGCGCTC GGCGTGCCGC CCGTGCCGGA ACCCGATGCC GTCCGTCGCG CGGGCGATGC GTCCGCGGCG GCGGCGCCTT CGCCTTGGTC GTATTACTTT GTCGAGCCCG CCTCGGATGA TTGGTGGCGC GACGCCGCGC GCACGCCGAT CGACGTGCCG CGCGACGGCG TCGCGTCGCC GCGCGCGTTC GGCCTGCCCG ACGAAAACGC GTGGCGCGAT CTGCTGTCGA TCGGACGGCC GGCCGCCGAT CGGCATCGCG CGTCGCGCTA TTTCGTCGAC GACGCGCAGC CCACGAATGC GCATGCGCCT GGCGCCGGCG CGCATCCGCC GTTCGACGTC GCCGCGATTC GCCGCGATTT CCCGATACTC GCCGAGCGGG TGAACGGCAA GCCGCTCGTC TGGTTCGACA ACGCGGCGAC GACGCACAAG CCGCAGGCGG TGATCGATCG TCTCGCGCAC TTCTATGCAC ACGAGAATTC GAACATCCAT CGCGCGGCGC ATGCGCTCGC CGCGCGCGCG ACCGACGCGT ACGAGCACGC GCGCGCGACC GTGCAGCGCT TCATCGGCGC GGCGTCGCCG GACGAGATCG TGTTCGTGCG CGGCGCGACG GAGGCGATCA ATCTGATCGC GAAAACATGG GGTGTCGGCA ACGTCGGGGA AGGCGACGAG ATCGTCGTGT CGCATCTCGA GCATCACGCG AACATCGTGC CGTGGCAGCA GCTCGCCGCG TCGGTGGGCG CCGTGCTGCG CGTGATTCCC GTCGACGATG CCGGCCAGGT CTTGCTCGGC GAATACCGGA AGCTGCTCAA CGATCGCACG AAGATCGTCT CCGTCACGCA GGTATCGAAC GCGCTCGGCA CGGTCGTGCC GGTGAAGGAG ATCGTCGAGC TCGCGCATCG CGCGGGCGCG AAGGTGCTCG TCGACGGCGC ACAGTCGATT TCGCACATGC GCGTCGACGT GCGGGCGCTC GACGCCGATT TCTTCGTGTT CTCCGGCCAC AAGATCTACG GCCCGACGGG AATCGGCGTC GTCTATGGCA AGCGCGCGCT GCTCGACGGC ATGCCGCCGT GGCAAGGCGG CGGCAACATG ATCGCGGACG TGACGTTCGA GCGCACCGTA TTCCAGCCGC CGCCGAACCG TTTCGAGGCG GGAACGGGCA ACATCGCCGA TGCGGTCGGG CTCGGTGCGG CGCTCGATTA CGTGGCGCGG ATCGGCATCG AGCGGATCGC GCGCTACGAG CACGATCTGC TCGCCTATGC GGCGGGCGTG CTCGCGCCGG TGCCGGGTGT GCGGCTGATC GGCACCGCGC GCGATAAGGC GAGTGTGCTG TCGTTCGTGC TGAAGGGCTA TGAGACGGAA GAAGTCGGGC GAGCGCTGAA TGCGGCCGGC ATCGCCGTGC GGTCCGGGCA CCACTGCGCG CAGCCGATTC TGCGCCGCTT CGGGCTCGAA GCGACCGTGC GTGCGTCGCT CGCGTTCTAC AACACGCGCG ACGAGGTCGA TGCGATGGTC GACGTCGTGC GCGAGCTTGC GGCGCGGCGC ATCTAG
|
Protein sequence | MTIPTPTVDS AMSAAPVALP DAAPPAGLPD PATLARLASE FLAALPGQPA APNAGAGSGA VGGVPSALPA AAPMLASVSN PAPPGSPLAG PGGTGTGVPG IGVPPGKVPG ANLVPAPTHV LSLGNRTPAL VGHAAAQNGW PDSAVAIAPA LEPRAGGVAL GVPPVPEPDA VRRAGDASAA AAPSPWSYYF VEPASDDWWR DAARTPIDVP RDGVASPRAF GLPDENAWRD LLSIGRPAAD RHRASRYFVD DAQPTNAHAP GAGAHPPFDV AAIRRDFPIL AERVNGKPLV WFDNAATTHK PQAVIDRLAH FYAHENSNIH RAAHALAARA TDAYEHARAT VQRFIGAASP DEIVFVRGAT EAINLIAKTW GVGNVGEGDE IVVSHLEHHA NIVPWQQLAA SVGAVLRVIP VDDAGQVLLG EYRKLLNDRT KIVSVTQVSN ALGTVVPVKE IVELAHRAGA KVLVDGAQSI SHMRVDVRAL DADFFVFSGH KIYGPTGIGV VYGKRALLDG MPPWQGGGNM IADVTFERTV FQPPPNRFEA GTGNIADAVG LGAALDYVAR IGIERIARYE HDLLAYAAGV LAPVPGVRLI GTARDKASVL SFVLKGYETE EVGRALNAAG IAVRSGHHCA QPILRRFGLE ATVRASLAFY NTRDEVDAMV DVVRELAARR I
|
| |