Gene BMAA0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0490 
Symbol 
ID3086856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp503714 
End bp504664 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content64% 
IMG OID637564409 
ProductABC transporter, periplasmic glycine/betaine-binding protein 
Protein accessionYP_105262 
Protein GI53717093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCA CCACGACATT CGTATTCGGC GCGGCGCTCG CCGCGGCATG CGCGCTGCCG 
TCGCAATCCT TCGCGCAGGA CTCGGCCGCC TGCCGCAACG TGCGCTTCGC GGACATCGGC 
TGGACCGACA TCACGTCGAC GACGGCGCTC GCGTCGCTGC TGTTCGACGG TCTAGGCTAC 
AAGCCGACGA CGACGATCGC GTCCGTGCCG ATTTCGTTCG CAGGACTCAA GAGCAGGCAG 
CTCGACGTAT CGCTCGGCTA CTGGTGGCCG GTGCAGCAGC ATCAGTTGCA GCCGTTCCTC 
GATTCGAAAT CGATCTCGGT GGTCGAGCCG CCGAACCTGT CGGGCGCGAA GGCGACGCTC 
GCGGTGCCGA GCTACGTGTA CCAGGCCGGG CTGAAATCGT TCGACGACAT CGCGAAGCAT 
CGCGCCGAGC TCGACGGCAA GATCTACGGG ATCGAGCCCG GCAGCAGCGC GAACGCGACG 
ATCCAGAAGA TGATCGACAC GAACCAGTAC GGGCTCGGCG GCTTCAAGCT CGTCGAATCG 
AGCGAGGCGG GGATGCTCGT CACGGTCGAG CGCGCGATTC GCGACAAGAA GTGGGTCGTG 
TTCCTCGGCT GGGAGCCGCA TCCGATGAAC ATCCAGATCG GCATGAACTA CCTGTCGGGC 
GGCGACGCGG CGTTCGGCCC GAACTACGGC GAAGCGCGCG TGTACACGCT GACGTCGCCC 
GATTACATGG CGCGCTGCCC GAACGCGGGC AAGCTCGTCG GCAATCTGCG CTTCACCACG 
CAAATGGAAA ACCAGCTGAT GCAGGCGGTG ATGAACAAGG TGAAGCCCGC GGAAGCGGCG 
AAGGCGTACA TCCGAAAGAA TCCGCAAGTG CTCGATGTGT GGCTTGCCGG CGTGAAGACC 
TACGACGGCA AGGACGGGCT GGCTGCGGTG AAGGCTTATC TGGGGCTCTG A
 
Protein sequence
MKSTTTFVFG AALAAACALP SQSFAQDSAA CRNVRFADIG WTDITSTTAL ASLLFDGLGY 
KPTTTIASVP ISFAGLKSRQ LDVSLGYWWP VQQHQLQPFL DSKSISVVEP PNLSGAKATL 
AVPSYVYQAG LKSFDDIAKH RAELDGKIYG IEPGSSANAT IQKMIDTNQY GLGGFKLVES 
SEAGMLVTVE RAIRDKKWVV FLGWEPHPMN IQIGMNYLSG GDAAFGPNYG EARVYTLTSP 
DYMARCPNAG KLVGNLRFTT QMENQLMQAV MNKVKPAEAA KAYIRKNPQV LDVWLAGVKT 
YDGKDGLAAV KAYLGL