| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA0363 |
|---|
| Symbol | |
|---|
| ID | 3087579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 349087 |
|---|
| End bp | 350607 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637564288 |
|---|
| Product | sigma-54 dependent DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_105164 |
|---|
| Protein GI | 53716398 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0237331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACGA ATGCATCGAT TTCGGGCGGC TGGGTTCGGC TGCCCGCCGA TTACGGCGAC
GTGCTGCGGC GCGCGGCGGA GTCGCTGTTC AAGACCTTCG AGCACTCGAG CGTCGGCACG
CTGATCGTCG ACAAGGATGC GCGCGTCGTC TGGATCAATC AGCGTTACGC GGCGCGTTTC
GGGTTCGCCG ATCCGCAGCA GGCGATCGGC CGCGATTGCG AAGCGGTGAT TCCGCACAGC
CTGATGCGCG AGGTGGTCGC GACCGGCCGC CCGATCCTGC TCGACATCAT GGAGACGGGC
CGCGAGCCGC TCGTCGTCAC GCGCCTGCCG CTGACGGACG ACGCGGGCGA GACCGTCGGC
GCGATCGGCT TCGCGCTGTT CGACGAGCTG AAGACGCTCA CGCCGCTCTT TTCGCGCTAC
ATGCAGGTCC AGCAGGAGCT GATCGCGACG CAACGCTCGC TCGCGCAGGC GCGGCGGGCG
AAATACACGT TCGCGAGCTT CGTCGGCACG AGCGCGGTGA GCCTCGAGAC GAAGCGGCAG
GGGCGGCGCG CCGCGCAGGT CGATTCGCCG GTGCTGCTGC TCGGCGAGAC GGGCACCGGT
AAGGAGCTGC TCGCGCATGC GATCCACGCG GCGTCCGCGC GGGCATTGAA GCCGCTCGTG
ACCGTCAACG TCGCCGCGAT TCCCGATGCG CTGCTCGAAA CCGAGTTCTT CGGCGCGGCG
CCGGGCGCGT ACACGGGCGC GGATCGCAAG GGGCGCGTCG GCAAGTTCGA GCTTGCCGAC
GGCGGCACGC TCTTTCTCGA CGAAATCGGC GACATGCCGG TGCCGCTGCA GGGCAAGCTG
CTGCGCGTGC TGCAGGACAA GGAGTTCGAG CCGGTCGGCT CGAACCGGAT CGTGCGCGCG
AATGTGCGGA TCATCGCGGC GACGTCGGCC GAATTGCCGG CGCTCGTCGC GGAAGGGCGC
TTTCGCGCGG ACCTTTATTA CCGGCTGAAC GTGCTGACGA TCCATGCGCC GCCGCTGCGC
GAGCGCGCAT CGGACATCGA GGCGCTCGTC TACACGATGC TCGAGGAACT CGCCGCGCAG
CATGGGCTGG CCGAGCACTG CGAACTGACC GACGACGCGC TGCGCCTGCT GTGCGCGTAT
CCGTGGCCCG GTAACGTGCG CGAACTGCGC AACACGCTCG AGCGCGCGCT GATGCTGTCC
GATCGCGCGT TGATCGATGC GCGCGCGCTC GCGCCGTTCA TCGGGCCGGC GCGCGGCGCG
GGGGGCGGTG TCGGGGCGGG CGGTGGGGCG GGGGCGGGCG GCGTCGGTCC GGCCGCGGTC
GCCATCGCGG CGCAGACTGC CATGGCCGAT ACGCGCGCGG CGGCGTCATC CTATGCGGAC
GCATTCGCCG CGTGGGAGCG TCAATTCCTG ATCGACGCGC TTGCCGCGTC CAACGGCAAG
GTGACGGAAG CGGCCGCGCG CATCGGCATC GGGCGTGCGA CGTTCTACAA GAAGCTCGCG
ACGCTCGGCA TTGATACGTA G
|
|---|
| Protein sequence | METNASISGG WVRLPADYGD VLRRAAESLF KTFEHSSVGT LIVDKDARVV WINQRYAARF
GFADPQQAIG RDCEAVIPHS LMREVVATGR PILLDIMETG REPLVVTRLP LTDDAGETVG
AIGFALFDEL KTLTPLFSRY MQVQQELIAT QRSLAQARRA KYTFASFVGT SAVSLETKRQ
GRRAAQVDSP VLLLGETGTG KELLAHAIHA ASARALKPLV TVNVAAIPDA LLETEFFGAA
PGAYTGADRK GRVGKFELAD GGTLFLDEIG DMPVPLQGKL LRVLQDKEFE PVGSNRIVRA
NVRIIAATSA ELPALVAEGR FRADLYYRLN VLTIHAPPLR ERASDIEALV YTMLEELAAQ
HGLAEHCELT DDALRLLCAY PWPGNVRELR NTLERALMLS DRALIDARAL APFIGPARGA
GGGVGAGGGA GAGGVGPAAV AIAAQTAMAD TRAAASSYAD AFAAWERQFL IDALAASNGK
VTEAAARIGI GRATFYKKLA TLGIDT
|
|---|
| |