Gene BMA3131 details

Gene Information

• Locus tag: BMA3131
• Symbol: nirD-1
• ID: 3090438
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 3225349
• End bp: 3225744
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637563695
• Product: nitrite reductase [NAD(P)H], small subunit
• Protein accession: YP_104615
• Protein GI: 53724095
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCCA CCCAACCCGA ATGGATCGCC GTCTGCCGAC TGGACGACAT CCCGCCGCTC 
GGCGCACGCG TCCTCACGCG CGAGGCCGGC ATGCCGATCG CCCTCTTTCG CACCGCGAGC 
GACGCGGTGT TCGCGCTCCT CGACCGCTGC CCGCACAAGG GCGGCCCGCT GTCGCAGGGG 
ATCGTTCACG GCGAGCAGGT CACGTGTCCG CTGCACGGCT TCAATGTCGC GTTCTCGAGC 
GGCTGCGCGC TGCCGCCCGA CGAAGGCTGC ACGAGCGTCT TCAGCGTGAA GCGCGACGGC 
GACACGGTGC TGCTCGAGCG CACCGAGCTC GCGACGCTCG GCGTCGACGA CGCGGCGCAG 
CCGGCTGCGC TCGCATCGCC GGGCGCAGCC GCATGA 

 

Protein sequence

MSATQPEWIA VCRLDDIPPL GARVLTREAG MPIALFRTAS DAVFALLDRC PHKGGPLSQG 
IVHGEQVTCP LHGFNVAFSS GCALPPDEGC TSVFSVKRDG DTVLLERTEL ATLGVDDAAQ 
PAALASPGAA A