| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA2785 |
|---|
| Symbol | gspE |
|---|
| ID | 3091388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | - |
|---|
| Start bp | 2873546 |
|---|
| End bp | 2875039 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637563380 |
|---|
| Product | general secretion pathway protein E |
|---|
| Protein accession | YP_104303 |
|---|
| Protein GI | 53723932 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.254947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCAGG CGCTCGCGCA AGGCGCCCCG GATCAGCCGG CCGCCGGCGC GCCGTCGCCG
ATCGCCGCGC GGCTGTTGCC GTACGGCTTC GCGAAGGCCG GCCAGATCCT GATCGCACAC
CAGCACGCGG ACACGCTCGA GGTGTGGATC AGCGAGCGCA CGAGCTCGGC CGCGCTCGCC
GAAGTCGCGC GCAACTTCGG CGCGATCTCG TTGCAGCGCA TGCCGGCCGA CGAGCTCGCG
CAGGCGATCA ACCATGCGTA CGCGCGCCAG GACGGCAGCG CCGCGCAGAT CGTCGGCGAG
GTCGAGGGCG AAGTCGATCT GTCGCGGCTG ATGCAGGACA TCCCCGAGGT CGAGGATCTG
CTCGAATCGG AAGACGACGC GCCGATCATC CGGATGATCA ACGCGCTCCT CACGCAAGCG
GCGCGCGAGC AGGCGTCGGA TATCCACATC GAGCCGTTCG AGAACGCGTC GGTCGTGCGC
TTTCGCGTGG ACGGCACGCT GCGCGACGTC GTGCGCCCGA AGAAGGCGCT GCACGGCGCG
CTGATCTCGC GCATCAAGAT CATGGCGCAG CTCGACATCG CCGAAAAGCG CCTGCCGCAG
GACGGCCGGA TCACGCTGCG CGTGGGCGGG CGGCCCGTCG ACGTGCGGGT GTCGACGCTG
CCGACCGGGC ACGGCGAGCG CGCGGTGCTG CGTCTGCTGG AGAAGGATGC GCAGCGGCTG
AATCTGGAAG CGCTCGGGAT GGGCCGCGAC ACGCTCGTGC AGTTCGACAA GCTGATTTCC
CGCCCGCACG GCATCGTGCT CGTGACGGGG CCGACCGGCT CGGGCAAGAC GACGACGCTG
TACGCGTCGA TGTCGCGGCT CGAAACCGCG ACGACCAACA TCATGACGGT CGAGGATCCG
ATCGAATACG ATCTGTCCGG CATCGGCCAG ACGCAGGTGA ACGAGCGGAT CGGGATGACG
TTCGCGCGCG CGCTGCGCTC GATCCTGCGT CAGGACCCGG ACATCATCAT GATCGGCGAA
ATCCGCGATC TCGAAACCGC GCAGATCGCC GTGCAGGCGT CGCTCACGGG CCACCTGGTG
CTCGCGACGC TGCACACGAA CGACGCGGCG TCGGCCGTCA CGCGTCTCAC CGACATGGGC
GTCGAGCCGT ACCTGCTCGC GTCTTCGCTG CTCGGCGTGC TCGCGCAGCG GCTCGTGCGC
CAGCTCTGCC CGGCGTGCAA GGAGGAGCGG CACGAGGGCG GCCGCGCGGT CTGGCATCCG
GTCGGCTGCG ACAAGTGCGG GCATTCGGGC TACACGGGGC GTCGGGGCGT GTACGAGCTG
CTCGTCATCG ACGATTCGAT CCGCTCGCTG ATTCACCGCA ACGCGGCCGA TGCGGAGATT
CTCGCCACCG GCCGCGCGAA CGGGATGCGC ACGCTGCGCG ACGACGCCGA GCGCTGGCTC
GCGGCGGGCG CGACGTCGCT CGAGGAAGTG CTGCGCGTGA CGGGAGGCGC ATAG
|
|---|
| Protein sequence | MTQALAQGAP DQPAAGAPSP IAARLLPYGF AKAGQILIAH QHADTLEVWI SERTSSAALA
EVARNFGAIS LQRMPADELA QAINHAYARQ DGSAAQIVGE VEGEVDLSRL MQDIPEVEDL
LESEDDAPII RMINALLTQA AREQASDIHI EPFENASVVR FRVDGTLRDV VRPKKALHGA
LISRIKIMAQ LDIAEKRLPQ DGRITLRVGG RPVDVRVSTL PTGHGERAVL RLLEKDAQRL
NLEALGMGRD TLVQFDKLIS RPHGIVLVTG PTGSGKTTTL YASMSRLETA TTNIMTVEDP
IEYDLSGIGQ TQVNERIGMT FARALRSILR QDPDIIMIGE IRDLETAQIA VQASLTGHLV
LATLHTNDAA SAVTRLTDMG VEPYLLASSL LGVLAQRLVR QLCPACKEER HEGGRAVWHP
VGCDKCGHSG YTGRRGVYEL LVIDDSIRSL IHRNAADAEI LATGRANGMR TLRDDAERWL
AAGATSLEEV LRVTGGA
|
|---|
| |