Gene BMA1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1913 
SymboldnaE 
ID3090818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp2004881 
End bp2008405 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content67% 
IMG OID637562568 
ProductDNA polymerase III subunit alpha 
Protein accessionYP_103508 
Protein GI53725488 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00377925 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATC CCCGTTTCGT TCACCTCCGC GTCCACTCCG AATTCTCGAT TGCCGACGGC 
ATCGTGCGTC TCGACGATAT CGTCAAGTCG GCGGCCGAAG ACGGTCAGGG CGCGCTTGCA
CTGACCGACC TCGGCAACGC GTTCGGTCTC GTCCGTTTCT ACAAGGAAGC CCGCGATGCG
GGCATCAAGC CGATCGCCGG CTGCGATGTC TGGATCACCA ACCACGACGA TCGCGACAAG
CCGTCGCGGC TGCTGCTGCT CGTCAAGGAC AAGCGCGGCT ACCTGAACCT CTGCGAGCTG
CTGTCGAAGG CGTGGCTCAC GAACCAATAC CGCGGCCGCG CGGAGCTCGA CGCGAGCTGG
CTCGAAGGCG AGCTCGCCGA AGGGCTGCTC GCGCTGTCAG GCGCGCAGCA GGGCGACATC
GGCCTCGCGC TCGCGGCGGG CAACGAGGCG GCCGCGCGCC GCCACGCGCA GCGCTGGGCG
CGGGTGTTCC CGGGCGGTTT CTATATCGAA TTGCAGCGCT ACGGCCAGCC GGGCGCGGAA
GCGTACATCC AGCAGGCGGT GACGATCGCG GCGGAGCTGA AGCTGCCCGT CGTCGCGACA
CATCCGCTGC AGTACATGAC GGCCGACGAT TTCACCGCGC ACGAGGCGCG CGTGTGCATC
TCGGAAGGCG ACATCCTCGC GAATCCGCGC CGCCAGAAAC GCTTCACGAC CGAGCAGTTC
TTCCGCACGC AGGGCGACAT GGCCGCGCTG TTCGCCGATC TGCCCTCGGC GCTCGCGAAC
ACGGTCGAGA TCGCCAAGCG CTGCAACCTG ACGCTCGAGC TCGGCAAGCC GAAGCTGCCG
CGGTTCCCGA CGCCCGACGG CATGTCGCTC GACGACTACC TCGTGCAGTT GTCGCAGGAA
GGGCTCGACA AACGCCTCGT GCAGCTCTAC CCGGACGAGG CCGAGCGCGA AGCGCAACGC
GGGAAGTACA ACCAGCGTCT CGATTTCGAG TGCGGCACGA TCAAGAAGAT GGGCTTTCCG
GGCTACTTCC TGATCGTCGC GGACTTCATC AACTGGGCGA AGAACAACGG CGTGCCGGTG
GGCCCCGGGC GGGGCTCGGG CGCGGGCTCG CTCGTCGCGT ATTCGCTCGG CATCACCGAC
CTCGATCCGC TGCGCTACAA CCTGCTGTTC GAGCGCTTCC TGAACCCGGA GCGGGTGTCG
ATGCCCGACT TCGACATCGA CTTCTGCCAG CACGGCCGCG ACCGCGTGAT CCAGTACGTG
AAGGAGAAGT ACGGCGCGGA CGCGGTGTCG CAGATCGCCA CCTTCGGCAC GATGGCCGCG
AAGGCGGCCG TGCGGGATAT CGGCCGGGTG CTCGATCTCG GCTACATGTT CACCGACGGC
GTCGCGAAGC TGATCCCGTT CAAGCCGGGC AAGCACGTGA CGATCGCCGA CGCGATGAAG
GAAGAGCCGC TCCTGCAGGA GCGCTACGAC AACGAGGACG AAGTCCATCA GTTGCTCGAT
CTCGCGCAGC GCGTGGAGGG CCTCACGCGC AACGTCGGGA TGCACGCGGG CGGCGTGCTG
ATCGCGCCCG GCAAGCTGAC CGATTTCTGC CCCCTCTACA CGCAGGGCGA CGAAGGCGGC
GTCGTCAGCC AGTACGACAA GGACGACGTC GAAGCCGTCG GCCTCGTGAA GTTCGACTTT
CTCGGCCTCA CGACGCTCAC GATTCTCGAC TGGGCCGAGC GCTACATTCG CCGTCTCGAT
CCGAGCAAGG AGAACTGGTC GCTCGCGCAG GTGCCGCTCG ACGATCCGAC GTCGTTCCAG
ATCCTCAAGA AGGCCAACAC GGTCGCCGTG TTCCAGCTGG AAAGCCGCGG CATGCAGGGG
ATGCTGAAGG ACGCGCAGCC CGACCGCTTC GAGGACATCA TCGCGCTCGT GTCGTTGTAC
CGGCCGGGCC CGATGGACCT GATTCCGAGC TTCTGCGCGC GCAAGCACGG GCGCGAGAAG
GTCGACTATC CGGATCCGCG CGTCGAGCCT GTCCTGAAAG AGACCTACGG GATCATGGTC
TATCAGGAGC AGGTGATGCA GATGGCGCAG ATCATCGGCG GCTATTCGCT CGGCGGCGCG
GACTTGCTGC GTCGCGCGAT GGGCAAGAAG AAGCCCGAGG AGATGGCCAA GCATCGCGAG
ATCTTCGCCG AGGGCGCCGC GAAGAACGGC CTCACGCGCG AGAAGTCCGA CGAGATCTTC
GACCTGATGG AGAAGTTCGC GGGCTACGGC TTCAACAAGT CGCACGCGGC CGCGTACGCG
CTGCTCGCGT ATTACACCGC GTGGCTGAAG GCGCACCATC CGGCCGAATT CATGGCGGCC
AACATGACGC TCGCGATGGA CGACACCGAC AAGGTGAAGA TCCTGTTCGA CGATTGCCTC
GTCAACGGCC TCGCCGTGCT GCCGCCCGAC ATCAACCGTT CGAACGATCG CTTCGAGCCC
GTCGCCGAGG CCGACGGCAA ACGCTCGCGC ACGATCCGCT ACGGCCTCGG CGCGATCAAG
GGCAGCGGCC AGAACGCGAT CGAGGAGATC CTGCGCGCAC GCGAGGAAAA GCCGTTCGCC
GATCTGTTCG ATTTTTGCGA GCGGATCGAC CGCCGCGTCG TGAACCGCCG CACGATCGAA
GCGATGATTC GCGCGGGCGC ATTCGATTCG CTGCACGAGA ATCGCGCGCA GTTGCTCGCA
TCGGTGCCGC TCGCGATGGA GGCCGCCGAG CAGGCGGCCG CGAACGCGCT GCAGGCGGGC
CTGTTCGACA TCGGCGGCGT GCCCGCGCAC CAGCATGCGC TCGTCGACGA GCCGGCGTGG
GACGACAAGC GTCGCCTGCA GGAAGAGAAG GGCGCGCTCG GCTTCTACCT GTCCGGCCAC
CTGTTCGACG CGTATCGCGA CGAGGTGCGC CGTTTCGTGC GCCAGAAGCT CGGCGAGCTG
AAGGAAGGGC GCGACAAGGT GGTGGCCGGC GTGATCGCGT CGTTGCGCAC GCAGATGACG
CAGCGCGGCA AGATGGTGAT CGCGTTGCTC GACGACGGCA CCGGCCAGTG CGAAGTCACC
GTGTTCAACG AGCAGTTCGA CGCGAACCGC GCGCTCTTCA AGGAGGACGA GCTGCTGATC
GTCCAGGGGC AGGCGCGCAA CGACGCGTTC ACGGGCGGAA TTCGCTTCAC CGCCGAGTCG
GTGATGGACC TCGAGCGTGC GCGCAGCCGC TACGCGCAGG CGGTGCGGAT GACGATGAAC
GGCAACGCGG ACGCGGCGGC GCTGCGCCGC GTGCTGGAAG CGCACGTCGC GAAACCCGAC
GAGACGCCGC CCGCCGCGGC GCCGGCGCCG CGCGGCGGTC GCGACGGCGG GCGGCGGGCG
CAGGCGGCGA TACCGAATGG TCTCGCCGTG CGGATCGCAT ACAGCAACGC GCGTGCGCAA
GGCGAGATGC GCCTGGGCGA CGCATGGCGC GTGAAGCCGA GCGACGCGTT GCTCGCCGAT
CTGCGCGCGG CGTTCGGCGG CAGCGTCGTC GAGATCGTCT ACTGA
 
Protein sequence
MSDPRFVHLR VHSEFSIADG IVRLDDIVKS AAEDGQGALA LTDLGNAFGL VRFYKEARDA 
GIKPIAGCDV WITNHDDRDK PSRLLLLVKD KRGYLNLCEL LSKAWLTNQY RGRAELDASW
LEGELAEGLL ALSGAQQGDI GLALAAGNEA AARRHAQRWA RVFPGGFYIE LQRYGQPGAE
AYIQQAVTIA AELKLPVVAT HPLQYMTADD FTAHEARVCI SEGDILANPR RQKRFTTEQF
FRTQGDMAAL FADLPSALAN TVEIAKRCNL TLELGKPKLP RFPTPDGMSL DDYLVQLSQE
GLDKRLVQLY PDEAEREAQR GKYNQRLDFE CGTIKKMGFP GYFLIVADFI NWAKNNGVPV
GPGRGSGAGS LVAYSLGITD LDPLRYNLLF ERFLNPERVS MPDFDIDFCQ HGRDRVIQYV
KEKYGADAVS QIATFGTMAA KAAVRDIGRV LDLGYMFTDG VAKLIPFKPG KHVTIADAMK
EEPLLQERYD NEDEVHQLLD LAQRVEGLTR NVGMHAGGVL IAPGKLTDFC PLYTQGDEGG
VVSQYDKDDV EAVGLVKFDF LGLTTLTILD WAERYIRRLD PSKENWSLAQ VPLDDPTSFQ
ILKKANTVAV FQLESRGMQG MLKDAQPDRF EDIIALVSLY RPGPMDLIPS FCARKHGREK
VDYPDPRVEP VLKETYGIMV YQEQVMQMAQ IIGGYSLGGA DLLRRAMGKK KPEEMAKHRE
IFAEGAAKNG LTREKSDEIF DLMEKFAGYG FNKSHAAAYA LLAYYTAWLK AHHPAEFMAA
NMTLAMDDTD KVKILFDDCL VNGLAVLPPD INRSNDRFEP VAEADGKRSR TIRYGLGAIK
GSGQNAIEEI LRAREEKPFA DLFDFCERID RRVVNRRTIE AMIRAGAFDS LHENRAQLLA
SVPLAMEAAE QAAANALQAG LFDIGGVPAH QHALVDEPAW DDKRRLQEEK GALGFYLSGH
LFDAYRDEVR RFVRQKLGEL KEGRDKVVAG VIASLRTQMT QRGKMVIALL DDGTGQCEVT
VFNEQFDANR ALFKEDELLI VQGQARNDAF TGGIRFTAES VMDLERARSR YAQAVRMTMN
GNADAAALRR VLEAHVAKPD ETPPAAAPAP RGGRDGGRRA QAAIPNGLAV RIAYSNARAQ
GEMRLGDAWR VKPSDALLAD LRAAFGGSVV EIVY