Gene BMA1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1912 
Symbol 
ID3090382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp2003051 
End bp2004775 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content65% 
IMG OID637562567 
ProductABC transporter, permease/ATP-binding protein 
Protein accessionYP_103507 
Protein GI53725482 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR02203] lipid A export permease/ATP-binding protein MsbA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0734969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCC TCTGGCCGTA TGTGAAACCG CTGGTATGGG TGCTCGTCGC AGGCGTGCTC 
GCGATGGCGG CGGTCGCCGC GACGGAAGCC GGAATTCCCG CGCTGCTCAA GCCGCTTCTC
GACCATGGCT TCGGCTCGAA GGGAGACATG ACGACGAAGC TGTACGTGCC TGCGGCGGTC
GTCGGTCTCG CGCTCGCGCG CGCGATCGCG CAATATGCGT CCGGCTATCT GCTGCAGTAC
GTGTCGAACC GCATCCTGCT CGATCTGCGG ATCCAGATGT TCGAGCGGAT GATTCACACC
GGCGTGTCGT TCTTCCAGCG CGAGACGGCA AGCACGGTGA TCAACGCGGT CGTGTTCGAA
GTGAACCAGG TGCTGAGCGT GCTGATGGGC GTGACGATCA CGCTCGTGCG CGATTCGCTG
ACGGTCGTCT TCCTGCTCGG CTATCTGTTC TATCTGAACT GGCGCCTGAC GCTCATCGTC
GCGATTCTGT TGCCGTGCAT CGGCTGGCTC GTCGGCAAGA TCAACCGTCG GCTGCGCCGG
CTGAACCGCG AGCATCAGAC GCTCACGAAC CAGCTCGCGT ACATCGTCGA GGAGACCGTC
GGCGGCTACA AGGTCGTCAA GGTTCATAAC GGCGAACCAT ACGAGATCGG GCGCTTCAAC
GAGCTGAGCC GCAAGCTGCG CGGCTATTCG ATGCGCATGA CGGTATCGGG CGGGCTTGCC
CAGCCGCTCA CGCAGTTCCT CGCATCGATC GCGCTCGCTG TCGTGCTGAC GATTGCGGTC
GTTCAGTCGG CGAACGATCA GACGACGGTC GGCGGCTTCG TCGCGTTCGT GACCGCGATG
CTGCTCATCA TTTCGCCGCT CAAGCATCTG ATGGACGTGA ATCAGCCGCT GCAGCGCGGG
ATGACCGCGG CCGAGCTGAT CTTCGGGCTG ATCGACGAGC CGCGTGAGCC CGAAGGCGGC
GGCAAGCCGC TCGCACGCGC GTCGGGGGCG ATCGAGTTCA GCCATGTGTC TTTCTCTTAC
GGCATGTCGC GCGACGGCCG GCAAACGCTC GACGACGTAT CGTTTACCGT CGCGCCGGGC
GAGATGGTCG CGCTCGCGGG CCCGTCCGGC AGCGGCAAGA CGACGCTCGT GAATCTGCTG
CCGCGCTTCT TCGATCCTTC GTCGGGCTCG GTGCGTGTCG ATGGCGTCGC GCTCCCCGAG
TACAGCCTGC GCGACCTGCG CAATCAGATT GCGATGGTGA GCCAGGACGT CGTGCTCTTC
AACGATACGA TCGCCGCGAA CGTCGCGTAC GGCCAGGCGC CCGAACGCGA CCGCGTGGAG
GCGGCACTGC GTGCGGCGAA CCTATGGGAA ACCGTCACCG CGATGCCCGA CGGCATCGAT
ACACTCGTCG GCGACAACGG AATGCGGCTG TCGGGCGGCC AGCGCCAGCG GCTCGCGATC
GCCCGTGCGA TCTACAAGGA TGCGCCGATC CTGATTCTCG ACGAGGCGAC GTCCGCGCTC
GATTCCGAAT CGGAGCGGCA CGTGCAGGCG GCGCTCGAGA CGCTGATGAA GGGGCGCACG
ACGCTCGTGA TCGCGCACCG CCTGTCGACG ATCGAGCGCG CCGACCGGAT CCTTGTGCTC
GAAGGCGGCA AGATCGTCGA AAGCGGCAGC CACCGCGAAT TGCTCGAGCA GGGCGGGCTC
TACGCGCACC TGCACCGCAT CCAGTTCCAG CAGGACGCGG GATGA
 
Protein sequence
MRRLWPYVKP LVWVLVAGVL AMAAVAATEA GIPALLKPLL DHGFGSKGDM TTKLYVPAAV 
VGLALARAIA QYASGYLLQY VSNRILLDLR IQMFERMIHT GVSFFQRETA STVINAVVFE
VNQVLSVLMG VTITLVRDSL TVVFLLGYLF YLNWRLTLIV AILLPCIGWL VGKINRRLRR
LNREHQTLTN QLAYIVEETV GGYKVVKVHN GEPYEIGRFN ELSRKLRGYS MRMTVSGGLA
QPLTQFLASI ALAVVLTIAV VQSANDQTTV GGFVAFVTAM LLIISPLKHL MDVNQPLQRG
MTAAELIFGL IDEPREPEGG GKPLARASGA IEFSHVSFSY GMSRDGRQTL DDVSFTVAPG
EMVALAGPSG SGKTTLVNLL PRFFDPSSGS VRVDGVALPE YSLRDLRNQI AMVSQDVVLF
NDTIAANVAY GQAPERDRVE AALRAANLWE TVTAMPDGID TLVGDNGMRL SGGQRQRLAI
ARAIYKDAPI LILDEATSAL DSESERHVQA ALETLMKGRT TLVIAHRLST IERADRILVL
EGGKIVESGS HRELLEQGGL YAHLHRIQFQ QDAG