Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA1750 |
Symbol | hrpA |
ID | 3089541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 1835404 |
End bp | 1839531 |
Gene Length | 4128 bp |
Protein Length | 1375 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637562423 |
Product | ATP-dependent helicase HrpA |
Protein accession | YP_103368 |
Protein GI | 53724183 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.31583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATG TACCTAAAAG TCCCGCGCAA AAACGTGCGG GCACGCCGGG CGAGCCGCAG CCCGCCGGCG CCGCTGCGCC GCGGCCACCG CGCCCCCGGC AGGCGCCGCC CGCGCAGGCG CGCGCGCCGC GCGCCGAGCG CCGCGACGCC GGCCCCGAAG CCGCCCGCGC GCCGCATGCG CCGCGCACGC GGTGCGCGCC GAATCCCGTT CCGCCGATCA CGTTTGCCGA AAGCTTGCCC GTGTCGGGCA AGCGCGACGA GATCGCGCGC GCGATCGCCG CTCACCCGGT CGTGATCGTC TGCGGCGAGA CGGGCTCGGG CAAGACCACC CAGTTGCCGA AGATCTGCCT GGCGCTCGGC CGCGGCCTCG GCGCGGGCGG CGCGGGCCTG ATCGGCCACA CGCAGCCGCG CCGGCTCGCG GCGTCGTCGA CGGGCCGCCG GATCGCCGAG GAGCTCGGCA CGCCGTTCGG CGAGGTGGTC GGCTACAAGG TGCGCTTCAC CGACAACCTC GCCCCGGGCG CCTCGGTCAA GCTGATGACG GACGGGATCC TGCTCGCCGA GACGCAGACC GACCCGCTGC TGAAGGCGTA CGACACCCTC ATCATCGACG AGGCGCACGA GCGCAGCCTG AACATCGATT TCCTGCTCGG CTACCTCCGG CAGATCCTGC CGAGGCGGCC GGACCTGAAG CTGATCGTCA CGTCGGCGAC GATCGACGCC GAGCGCTTCG CGCGCCATTT CGGCAGCGAC GAGCGGCCCG CGCCGGTGAT CGAGGTGAGC GGGCGGCTGT ATCCGGTCGA GGTGCGCTAC CGGCCGATCG CCGATGACCG GCCGGCCGCC GTCCGGCACG CGGAAGGCGG GAGCTCGGGC CGCGATCGCG CGAAGAGCGC GCGCGAGGCC GAGCGCGACC TGATGGACGG CATCGTCGAC GCGGTCGACG AGCTGTGCCG CGAGGGCCCC GGCGACGTGC TCGTGTTCCT GCCCGGCGAG CGCGAGATCC GCGACGCGGC CGAGGCGCTG CGCAAGCACC ATCCGCCGCA CACCGAGATC CTGCCGCTGT TCGCGCGGCT GTCCGCGGCC GAGCAGGAGC GCGTGTTCAA GGCGTCGAAC GCGCGGCGGA TCGTGCTCGC GACGAACGTC GCCGAAACGT CGCTGACCGT GCCGGGCATC CGCTATGTCG TCGACACGGG CTTGGCGCGC GTGAAGCGCT ATTCGTACCG GAACAAGGTC GAGCAGTTGC AGATCGAGCC GATCTCGCAG GCGGCCGCGA ACCAGCGCGC GGGCCGCTGC GGCCGCGTCG CCGACGGCAT CTGCATCCGC CTCTACGAGG AAAGCGATTT CGCCGGCCGC GCACGCTTCA CCGATCCGGA AATCCTGCGC TCGTCGCTCG CGTCGGTGAT CCTGCGGATG AAATCGCTGC ATCTGTCGGC GATCGAATCG TTTCCGTTCA TCGAGCCGCC GCCGGGCCGC GCGATCGCGG ACGGCTATCA GCTGCTCAAC GAGCTCGGCG CGGTCGACGA CGAGAACGCG CTCACGCCGC TCGGCCGCGA GCTCGCGCGG CTGCCGCTCG ATCCGCGCGT CGGCCGGATG ATCCTCGCCG CGCGCGACCA GCAGGCGCTG CGCGAAGTGC TCGTGATCGC GAGCGCGCTG TCCGTGCAGG ACCCGCGCGA GCGCCCGGTC GACGCGCAGG AGCAGGCCGA CCAGGCGCAC CGGCGCTTCG CCGACGAGCG CTCCGAGTTC CTTCAGTGGC TGCGGATCTG GGCGTGGTTC GAGGAGGCGG TCGCGCACAA GAAGTCGAAC CGGCAACTCG TCGACGCGTG CCGGCAGCAT TTCCTGTCGC ACCTGCGGCT GCGCGAATGG CGCGATGTCC ACTCGCAGCT CCTGACCGTC GTGCGCGAGC ACGGCTGGCG GCTGAACGAA GCCGATGCGA CGTTCGAGCA GATCCATCTG TCGCTGTTGA CGGGCCTGCT CGGCAACATC GGCTTCAAGG CCGAGGACGA GCCGCACTAC CTCGGCGCGC GCGGCATCAA GTTCCATCTG TGGCCGGGCT CCGCGCTCGT GAAGAAGGCG GGGCGCTGGG TGATGGCGGC CGAGCTCGTC GAGACGAGCC GCCTCTATGC GCGCTGCATC GCGAAGATCG AGCCCGAATG GATCGAGCGG ATCGGCGCGC ATCTGCTGAA GAAATCGCTG TCCGAGCCGC ACTGGGAGAA GCGGCCCGCG CAGGTCGCCG CGTTCGAGCG CGCGACGCTG TACGGGCTCA CCATCTATCA CCGGCGGCGC GTCGCGTTCG GCCGGCAGGA CCCGGCGCGC GCGCGCGAGC TGTTCATCCG CGGCGCGCTC GTCGACGGCG AATTCGACAC GAAGCTCGCG TTCTTCGCGC ACAACCGCAA GCTGCTCGCC GACATCGAGC AGCTCGAGCA CAAATCGCGC CGCCAGGACG TGCTCGTCGA CGACGAGCTG ATTCACGCGT TCTACGATCA GGCGATTCCG GCCGGCATTC ACACGGGCGC CGCGTTCGAG CGCTGGTATC GCGACGAGGT GAGCAAGAGC GGGCAGCCGG AAGACAAGCT GCGCCTGCTG TATCTGTCGC GCGACGATCT GATGCGCCAC GAGGCGGCGG GCGTGACGAC CGAGCTGTTT CCGAAGCGCG TGACGATGGC GGGCGTCGAG ATGGCGCTCG CGTACCACTT CGAGCCGGGC TCGCCGCGCG ACGGCGTGAC GCTCGCGGTG CCGCTCTTCG CGCTGAACCA GGTCGACGCG CGCCGCGCCG AATGGCTCGT GCCCGGCATG CTCAAGGAGA AGGCGCATCT GCTGCTGAAA TCGCTGCCGC AGAAGCTGCG CCGCCATTGC GTGCCGCTGC CGGAGTACGC GGCGGGCTTC GTCGAGCGCG CCGGGCGCGA GCGCTTCGGC GCGGGCGGCC TCGTCGACGC GCTGATCGCC GACGTTCGCG AGCAGACGCA GGTCGCGACG AAAACGTCCG ATTTCAAGCT GGAGACGCTG CCCGCGCACC TGTTCATGAA CTTCAAGGTG ATCGACGAGC ACGGCCGGCA ACTCGCGATG GGGCGCAATC TCGCGCAACT GCGCGCGGAA CTGGGCGCGC AGGCGCAGCA GCACTTCCAG AAGATCGCCG CCGCGGCGAC GCTCGCGCCG GCGGGCGAGC CCGCCGCGGC GGCCGCCGGC GCGAGCGGCG CGCGGGCACG GCGCGTGCCG CTCGGCGCGC CGCCGCGGGC GGCCGAGCCG GCGGCGCAAG CGGGCGCGGC CGCCGGCGCG ACCGCGCTCT ACGAGAACCT GACGACGTGG AACTTCGGCA AGCTGCCGGA ACTCCTCGAA ATCCGCCGGC GCGGCGAGAC GCTGTTCGGC TACCCGGCGC TCGTCGATCG CGGCACGCAT TGCGACGTCG AGGTGTTCGA TTCGCCCGAC GAGGCGGCGC GGATCCACCG CGCGGGCCTG CGGCGCCTGT TCGCGCTGCA ACTGAAGGAG CCGATCAAGT ATCTGGAGAA GAACCTGCCG GGGCTGCGCG AGATGGCGAT ACAGTACATG TCGCTCGGCA CGCAGGACGA GCTGCGCGAC CAGCTGATCG CGACCGCGCT CGACCGCGCG TGCCTGCAGG AACCGCTGCC CGCCGACGAC GCGAGCTTCC ACGCGCGCCG CGACGAGGGC AGGAGCCGCC TGAATCTGCT CGCGCAGGAG ATCGCGCGGC TCGTCGGGCA GATCCTCGCC GAGTACGCGG GGCTCGCGAA GAAGCTCGCG CAGGCCAAGC CGTTCCCGGC CGCGCACGCG GACATGCAGG GCCAGCTCGC CGCGCTCGTC GGCAAGCGCT TCGTCGTCGA TACGCCTTAC GCGCAGCTTG CGCACTTCCC GCGCTACCTG AAGGGAATCG CGCTGCGCAT CGACAAGCTG AAGGCCGATC CCGCGCGCGA CGCGCGGCAG GCGGCCGAGC TGCAGCCGCT CGCGCAGCAT TATCAGCGCT CGGTTGCGCA GCGCGGCGGC GTCGCGGACG CGCGGCTCGC CGAATTCCGC TGGCTGCTCG AGGAGCTGCG GATCTCGCTT TTCGCGCAGG AGCTGCGCAC GCCGATGCCG GTATCGGTCA AGCGGCTCTA CAAAGTGTGG GAGTCGATGC AGCGCTGA
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Protein sequence | MSNVPKSPAQ KRAGTPGEPQ PAGAAAPRPP RPRQAPPAQA RAPRAERRDA GPEAARAPHA PRTRCAPNPV PPITFAESLP VSGKRDEIAR AIAAHPVVIV CGETGSGKTT QLPKICLALG RGLGAGGAGL IGHTQPRRLA ASSTGRRIAE ELGTPFGEVV GYKVRFTDNL APGASVKLMT DGILLAETQT DPLLKAYDTL IIDEAHERSL NIDFLLGYLR QILPRRPDLK LIVTSATIDA ERFARHFGSD ERPAPVIEVS GRLYPVEVRY RPIADDRPAA VRHAEGGSSG RDRAKSAREA ERDLMDGIVD AVDELCREGP GDVLVFLPGE REIRDAAEAL RKHHPPHTEI LPLFARLSAA EQERVFKASN ARRIVLATNV AETSLTVPGI RYVVDTGLAR VKRYSYRNKV EQLQIEPISQ AAANQRAGRC GRVADGICIR LYEESDFAGR ARFTDPEILR SSLASVILRM KSLHLSAIES FPFIEPPPGR AIADGYQLLN ELGAVDDENA LTPLGRELAR LPLDPRVGRM ILAARDQQAL REVLVIASAL SVQDPRERPV DAQEQADQAH RRFADERSEF LQWLRIWAWF EEAVAHKKSN RQLVDACRQH FLSHLRLREW RDVHSQLLTV VREHGWRLNE ADATFEQIHL SLLTGLLGNI GFKAEDEPHY LGARGIKFHL WPGSALVKKA GRWVMAAELV ETSRLYARCI AKIEPEWIER IGAHLLKKSL SEPHWEKRPA QVAAFERATL YGLTIYHRRR VAFGRQDPAR ARELFIRGAL VDGEFDTKLA FFAHNRKLLA DIEQLEHKSR RQDVLVDDEL IHAFYDQAIP AGIHTGAAFE RWYRDEVSKS GQPEDKLRLL YLSRDDLMRH EAAGVTTELF PKRVTMAGVE MALAYHFEPG SPRDGVTLAV PLFALNQVDA RRAEWLVPGM LKEKAHLLLK SLPQKLRRHC VPLPEYAAGF VERAGRERFG AGGLVDALIA DVREQTQVAT KTSDFKLETL PAHLFMNFKV IDEHGRQLAM GRNLAQLRAE LGAQAQQHFQ KIAAAATLAP AGEPAAAAAG ASGARARRVP LGAPPRAAEP AAQAGAAAGA TALYENLTTW NFGKLPELLE IRRRGETLFG YPALVDRGTH CDVEVFDSPD EAARIHRAGL RRLFALQLKE PIKYLEKNLP GLREMAIQYM SLGTQDELRD QLIATALDRA CLQEPLPADD ASFHARRDEG RSRLNLLAQE IARLVGQILA EYAGLAKKLA QAKPFPAAHA DMQGQLAALV GKRFVVDTPY AQLAHFPRYL KGIALRIDKL KADPARDARQ AAELQPLAQH YQRSVAQRGG VADARLAEFR WLLEELRISL FAQELRTPMP VSVKRLYKVW ESMQR
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