Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA1559 |
Symbol | def |
ID | 3088206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 1619327 |
End bp | 1619860 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637562249 |
Product | peptide deformylase |
Protein accession | YP_103199 |
Protein GI | 53723743 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.523571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCG AGATTTTGAA GATGGGCGAT CCACGTCTGC TGGAAGTCGC CCGGCCGGTG GAGGCGTTCA ACACGCCGGA GCTGCACGCG CTCGTCGCGG ACATGTTCGA GACGATGCAT CACGCGAACG GCGCGGGGCT CGCCGCGCCG CAGATCGGCG TCGGGTTGCA GGTGATCATC TTCGGCTTCG GCAGCAGCGA GCGTTACCCG GAGGCGCCGC CCGTGCCGGA GACGGTGCTC GTCAATCCGA GCATCGAGTA CTTGCCGCCC GACCTGGAGG AGGGCTGGGA GGGCTGCCTG TCGGTGCCGG GGCTGCGCGG CGTCGTGAGC CGCTACCGGC GCGTGCGCTA CAGCGGCTTC GACCAGTACG GCGCGAAGCT CGAGCGGATC GCGGAAGGCT TCCACGCGCG GGTCGTCCAG CACGAATATG ATCATCTGAT CGGCAAGCTC TATCCGATGC GGATCACCGA TTTCTCGAAG TTCGGCTTCG CCGACGTGCT GTTCCCGGGG CTCGACGCGC AAGCGGACGA CTGA
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Protein sequence | MIREILKMGD PRLLEVARPV EAFNTPELHA LVADMFETMH HANGAGLAAP QIGVGLQVII FGFGSSERYP EAPPVPETVL VNPSIEYLPP DLEEGWEGCL SVPGLRGVVS RYRRVRYSGF DQYGAKLERI AEGFHARVVQ HEYDHLIGKL YPMRITDFSK FGFADVLFPG LDAQADD
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