Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A2084 |
Symbol | |
ID | 4891342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 2017796 |
End bp | 2018644 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640148345 |
Product | ABC transporter, permease protein |
Protein accession | YP_001079256 |
Protein GI | 126446498 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.217938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCAT CCACCACCGC CGGGTTTGCC GGCGGTATTC CGTTTCGTCG CGGCAAGCGG CGCCCGTCGT TCGGCGCCAT CGTCGTCAAC GGCGTCGTCG CGCTGTTCGC GCTGTATCTA CTGATGCCGA TCGTGCTGCT GCTGATCGGA TCGATCGGGC AGAGTTGGAC GAACACGCTG CTGCCCGCCG GCTTCACGTG GCGCTGGTTC GCCGAACTGG CCGCCGATCC GAGCTTGCGC CGCGCGTTCA GCGTGAGCTT CGTCGTCGCG CTCGCGTGCT GCGCGCTCGA CACGTTGGCC GGCGTGCCGC TCGCGTATGC GCTGCATCAT CGCGCGCTTC GCGGCCGCGG CGTTGCCGCG CGCGTCGTGA TGCTGACGCC GATCGGCGTG CCGGCGCTCA CGCTCGGCTT CGGCTACATC GTGGTATTCG GCGGCGACGC GTTGCCGTGG CTCGGCACGC TGCCGCTGAT GATCGCCGCG CATGCGGTGC TGACGCTGCC GTATCTGCTG CAGACGTTGT TGAGCGATCT GCGCCACCTC GATCTCGCGA AGCTCGAGGC CTGTGCGGCA ACGCTCGGCG CGCCGCCGCT GCGGCAGTTT TTCACGATCG TGCTGCCGAA CCTGCGGCAG AGCCTTTTTT CCGGGCTCGT GATGGTCGCG GCGCTATCGA TCGGCGAGTT CCAGGTATCG AACCTGATCG CCGGCTTTCG CTACCGCAAT TTCCCCGTCG TGCTGCTGCA GGCGTTCTAC GGCGCGTCCG GCATCGCCTG CGGGGCGAGT GTCGTGCTGC TGCTGCTCGC CGTACTCGCG ACGCTCGCGT CGACCCACAC CGTGCAACGA CTGAAGTGA
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Protein sequence | MRSSTTAGFA GGIPFRRGKR RPSFGAIVVN GVVALFALYL LMPIVLLLIG SIGQSWTNTL LPAGFTWRWF AELAADPSLR RAFSVSFVVA LACCALDTLA GVPLAYALHH RALRGRGVAA RVVMLTPIGV PALTLGFGYI VVFGGDALPW LGTLPLMIAA HAVLTLPYLL QTLLSDLRHL DLAKLEACAA TLGAPPLRQF FTIVLPNLRQ SLFSGLVMVA ALSIGEFQVS NLIAGFRYRN FPVVLLQAFY GASGIACGAS VVLLLLAVLA TLASTHTVQR LK
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