Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A2018 |
Symbol | |
ID | 4890007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 1951305 |
End bp | 1951853 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640732894 |
Product | type VI secretion protein |
Protein accession | YP_003276038 |
Protein GI | 262192894 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCGAC AAAAGGATGG ACAGAAATTC ATCGGGGAGA GTCGTGCGCC CCGCGTGCAG ATTGAATACG ACGTGGAGGT GTACGGCTCG CAGAAGAAGG TCGAGCTGCC GTTCGTCGCG GGCGTGATGG CGGACCTGTC GGGCGACAAC GTCGAGCCGC TCGGCCCGGT CGAGGATCGG CGCTTTCAGG AGATCGACGT CGAGAACTTC GATGAGCGCA TGGCGCAGAT CGCGCCGTCG CTGAGCTATC ACGTGAAGAA CGTGCTGACC AACGACGGCA CGCTGATTCC GATCGATCTG ACGTTCACGT CGATGGAATC GTTCGAGCCG GCGGACGTCG TCAAGCGCAT TCCCGAGCTG TCGACGCTGC TCGAGGCGCG CAACCGGCTG AAGGAGCTGC TGACCTACAT GGACGGCAAG GCGGCAGCCG AGGACGTGAT CCAGGAATTG TTGAAGAGCC CGCAGTGGGC GAACGAGGCC GACGCGGCGG AGCAATCCGG CGGCGCCGGC GAGGGTGGAG ACCATCAACC GGAAGAGGGT GCGAAATGA
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Protein sequence | MVRQKDGQKF IGESRAPRVQ IEYDVEVYGS QKKVELPFVA GVMADLSGDN VEPLGPVEDR RFQEIDVENF DERMAQIAPS LSYHVKNVLT NDGTLIPIDL TFTSMESFEP ADVVKRIPEL STLLEARNRL KELLTYMDGK AAAEDVIQEL LKSPQWANEA DAAEQSGGAG EGGDHQPEEG AK
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