Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A1192 |
Symbol | |
ID | 4889297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 1160976 |
End bp | 1161584 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640147460 |
Product | S54 family peptidase |
Protein accession | YP_001078378 |
Protein GI | 126445887 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.970208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTCG CCATCGTCGT CCTGAACGTG ATCGGTTTCC TCGTCGAGCT CGCCGCGCCC GAGCGCGTAC TGTCGCTGTT CGCGCTATGG CCGCCGCGCG CGGGCGCGGG CTTGCCGCCC GCCGCCGCAC CCGCGTTCCA TGTCTGGCAG CTCGTCACGT ACAGCGCGCT GCACGCGGGG CTGTCGCACC TGCTGTTCAA CATGCTCGGG CTCGTGATGT TCGGCCGCGA TGTCGAGCGC GCGCTCGGCC GCGCGCGCTT CGGCACGCTG TATCTCGCGA GCGTCGTATG CGGCGCGCTC ACGCAGCTCG CGCTCGCGCG CTATTCGGCG GCGGCCGCCG CGCCGACGAT CGGCGCGTCC GCCGGCGTGT TCGGCGTGCT CGCCGCGTAC GCGCTGCTGT ACCCGTCGCG CCGCGTCGTG CTGCTGATTC CGCCGATTCC GATGCGCGCG TGGGTGTTCG CGCTGCTCTA CGCGGGGGGC GAACTGCTGC TCGGCGTCGC GGGCGCGGCG AGCGGCATCG CGCATTTCGC GCATCTGGGC GGGATGTTCG GCGCGATCGC GCTGATGCTG GCATGGGGAC GGCCGCGCAG CGAATGGCCG GTTCAATGA
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Protein sequence | MTLAIVVLNV IGFLVELAAP ERVLSLFALW PPRAGAGLPP AAAPAFHVWQ LVTYSALHAG LSHLLFNMLG LVMFGRDVER ALGRARFGTL YLASVVCGAL TQLALARYSA AAAAPTIGAS AGVFGVLAAY ALLYPSRRVV LLIPPIPMRA WVFALLYAGG ELLLGVAGAA SGIAHFAHLG GMFGAIALML AWGRPRSEWP VQ
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