Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A1181 |
Symbol | czcA |
ID | 4890925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 1149881 |
End bp | 1153114 |
Gene Length | 3234 bp |
Protein Length | 1077 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640147449 |
Product | heavy metal efflux pump CzcA |
Protein accession | YP_001078367 |
Protein GI | 126445970 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.263304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGAGC GCCTGATCCG CTTCGCGATC GCGCACCGCT GGCTCGTGAT GCTCGCGATC GTCGCGGCCG CGTCGCTCGG CGTCTACAGT TACCAGAAGC TGCCGATCGA CGCGGTGCCC GACATCACGA ACGTGCAGGT GCAGGTCAAC ACGTCCGCGC CCGGCTATTC GCCGCTCGAG GCCGAGCAGC GGATCACGTA TCCGGTCGAG ACCGCGATGG CCGGCCTGCC GAACCTCGAG CAGACGCGCT CGATCTCGCG CTACGGGCTG TCGCAGGTCA CCGTGATCTT CAAGGACGGC ACCGACATCT ATTTCGCGCG CCAGCTCGTC AACGAGCGGA TCCAGGAAGC GAAGGACAAG CTGCCGCCCG GGATCGCGCC CGCGATGGGG CCGACCTCGA CGGGCCTGGG CGAGATCTAC CTGTGGACGG TCGAGGCGGA TGCGGGCGCG CGCAAGCCGG ACGGCACGCG CTACACGAGC GCCGATCTGC GCGAGCTGCA GGACTGGGTC GTGCGTCCGC AGTTGCGCAA CGTGCCGGGC GTGACCGAGG TGAACTCGAT CGGCGGCTAC GTGAAGGAAT ACCGCGTCGC GCCGAATCCG ACGAAGCTGA TGTCGTACGG GCTCACGCTC GCCGACGTCG TGCGCGCGCT CGAGCGCAAC AACGACAACG TCGGCGCGGG CTACATCGAA AAGCGCGGCG AGCAGTATCT CGTGCGCGTG CCGGGCCAGG CGCGCTCGGC CGAGGACATC GCGAACATCG TGCTCGTGAA CGCGGGCGGC GTGCCGGTGC GGATGAAGGA CATCGGCGCC GTCGATCTCG GCCGCGAGCT GCGCACGGGC GCCGCGACCG CGAACGGCGA GGAAGTCGTG CTCGGCACCG TGTTCATGCT GATGGGCGAG AACAGCCGCA CGGTCGCGAA GGCGGTGGCC GCGAGGATGG CCGACGTGAA CCGCACGCTG CCCGCCGGCG TGCGCGCGAT TGCCGTGTAC GACCGCACGG TGCTCGTCGA GAAGGCCGTG CGGACGGTGA AGAAGAACCT GCTCGAAGGC GCGGTGCTCG TGATCGCGGT TCTCTTCCTG TTCCTCGGCA ACATCCGCGC GGCGGTGATC ACCGCGCTCG TGATTCCGCT GTCGATGCTG ATGACCTTCA CCGGCATGGT CAACGCGAAG GTCAGCGCGA ACCTGATGAG CCTCGGCGCG CTCGATTTCG GCATCATCGT CGACGGCGCG GTCGTGATCG TCGAGAACTG CATTCGCCGG CTCGCGCACG CGCAGCAGGC GGCGGGCCGC CCGCTCACCC GCGACGAGCG CTTCGCCGAA GTGTTCGCCG CGTCGCAGGA GGCCCGCCGC GCGCTGATCT TCGGGCAACT GATCATCATG GTCGTCTATC TGCCGATCTT CGCGTTGACG GGCGTCGAGG GGAAGATGTT CCATCCGATG GCGATCACCG TCGTGATGGC GCTCGCGGCC GCGATGGCGC TCACCGTGAC GTTCATTCCG GCCGCGGTCG CGCTGTTCAT CGGCCGCCGA GTGGAGGAGA AGGAGAACCG GCTGATGAGC GCGGCGAAGC GGCTCTACGC GCCCGTGCTC GATGCGTTCG TCGCGCGGCC CGGGCAGGTG CTCGCGGGCG CGACGGCCGT GGTCGCGCTC TCGCTCGTGC TGGCGACGCG GCTCGGCAGC GAATTCATCC CGAGCCTGAA CGAAGGCGAC CTCGCGGTGT CCGCGCAGCG CATTCCGGGC ACGAGCCTCA CGCAATCGGT CGCGATGCAG CAGTCGATCG AGAAGACGCT GAAGGCGCGC TTCCCGGAGA TCGACCGCGT GTTCGCGCGC ACCGGCACCG CGGAGATCGC CGCCGATCCG ATGCCGCCGA ACCTGTCGGA CGGCTACATC ATGCTCAAGC CCGCCGACCA GTGGCCGGAC CCGCGCAAGT CGCGCGATGC GCTGCGTGGG GAAATCGAGG CGGTGCTCGC GCAGTTGCCG GGCAACGCGT ACGAGTTCTC GCAGCCGATC CAGTTGCGCT TTAACGAGCT GATCTCCGGC GTGCGCAGCG ACGTCGCGGT CAAGATCTTC GGCGACGACA TGGCGACGCT CAACGCAACG GGCGAGCAGA TCGCGGCCGC GCTGCAGAAG GTGCCGGGCG CGTCCGAGGT GAAGGTCGAG CAGACCACGG GCCTGCCCGT GCTGACCGTC AACCTCGATC GCGACAAGCT CGCGCGCTAC GGCGTGACGG TGGGCGACGT GCAGGACACG GTCGCCGCGG CGGTCGGCGG GCGCAAGGCC GGCCTGCTGT TCCAGGGCGA TCGCCGCTTC GACATCGTCG TGCGGCTGCC CGACGAGCTG CGCACCGACG TCGAGGCGAT CAAGCGGCTG CCGATCGCGC TACCCCTGGC CGCGCCGGCG GGCGCGAGCG GCCCGCTCGC GCAGGCGCCG TACGTGCCGC TCGCCGAGCT CGCGACGGTG GACACATCGC CCGGGCCGAA CCAGATCAGC CGCGAGGACG GCAAGCGCCG CGTCGTCGTC AGCGCGAACG TGCGCGGGCG CGACGTCGGC TCGTTCGTCG CCGACGCGCG CGAGCGGATC GCCTCGGACG TCCGGGTGCC CGCCGGCTAC TGGCTGTCGT GGGGCGGCCA GTTCGAACAG TTGCAAAGCG CGAGCGAGCG GCTGAAGATC GTCGTGCCGC TCGCGCTCGC GATGGTGTTC GTGCTGCTGT TCGTGATGTT CAACAACGCG AAGGACGGCC TGCTCGTGTT CACCGGCATC CCGTTCGCGC TCACGGGCGA CGTCGTGTCG CTGTGGCTGC GCGGCATTCC GCTGTCGATC ACGGCCGCGG TCGGCTTCAT CGCGCTATCG GGCGTTGCGG TGCTCAACGG CCTCGTGATG ATCTCGTTCA TCCGCAACCT GCGCGACGAA GGCGCGCCGC TCGACGCCGC GGTGCGCGAA GGCGCGCTCA CGCGGCTGCG GCCGGTGCTG ATGACGGCGC TCGTCGCGTC GCTCGGCTTC CTGCCGATGG CGTTCGCCAC CGGCACGGGC GCGGAGGTCC AGCGCCCGCT CGCGACGGTC GTGATCGGCG GCATCCTGTC GTCGACCGCG CTGACGCTGC TCGTTTTGCC GGTACTCTAT CGGGTGGCGC ACGCCGCGCC GCCGCGCGCC ACGCTCGGCG CACGCGCGGC CGGATGGCTC GCGAGGCTCG CGCCCGCGGC CGTGCTGCGC CGGCGGCGCG AATCATCGAG GTGA
|
Protein sequence | MFERLIRFAI AHRWLVMLAI VAAASLGVYS YQKLPIDAVP DITNVQVQVN TSAPGYSPLE AEQRITYPVE TAMAGLPNLE QTRSISRYGL SQVTVIFKDG TDIYFARQLV NERIQEAKDK LPPGIAPAMG PTSTGLGEIY LWTVEADAGA RKPDGTRYTS ADLRELQDWV VRPQLRNVPG VTEVNSIGGY VKEYRVAPNP TKLMSYGLTL ADVVRALERN NDNVGAGYIE KRGEQYLVRV PGQARSAEDI ANIVLVNAGG VPVRMKDIGA VDLGRELRTG AATANGEEVV LGTVFMLMGE NSRTVAKAVA ARMADVNRTL PAGVRAIAVY DRTVLVEKAV RTVKKNLLEG AVLVIAVLFL FLGNIRAAVI TALVIPLSML MTFTGMVNAK VSANLMSLGA LDFGIIVDGA VVIVENCIRR LAHAQQAAGR PLTRDERFAE VFAASQEARR ALIFGQLIIM VVYLPIFALT GVEGKMFHPM AITVVMALAA AMALTVTFIP AAVALFIGRR VEEKENRLMS AAKRLYAPVL DAFVARPGQV LAGATAVVAL SLVLATRLGS EFIPSLNEGD LAVSAQRIPG TSLTQSVAMQ QSIEKTLKAR FPEIDRVFAR TGTAEIAADP MPPNLSDGYI MLKPADQWPD PRKSRDALRG EIEAVLAQLP GNAYEFSQPI QLRFNELISG VRSDVAVKIF GDDMATLNAT GEQIAAALQK VPGASEVKVE QTTGLPVLTV NLDRDKLARY GVTVGDVQDT VAAAVGGRKA GLLFQGDRRF DIVVRLPDEL RTDVEAIKRL PIALPLAAPA GASGPLAQAP YVPLAELATV DTSPGPNQIS REDGKRRVVV SANVRGRDVG SFVADARERI ASDVRVPAGY WLSWGGQFEQ LQSASERLKI VVPLALAMVF VLLFVMFNNA KDGLLVFTGI PFALTGDVVS LWLRGIPLSI TAAVGFIALS GVAVLNGLVM ISFIRNLRDE GAPLDAAVRE GALTRLRPVL MTALVASLGF LPMAFATGTG AEVQRPLATV VIGGILSSTA LTLLVLPVLY RVAHAAPPRA TLGARAAGWL ARLAPAAVLR RRRESSR
|
| |