Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A1063 |
Symbol | |
ID | 4890314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 1000353 |
End bp | 1003748 |
Gene Length | 3396 bp |
Protein Length | 1131 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640147336 |
Product | serine protease |
Protein accession | YP_001078255 |
Protein GI | 126447453 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATGA CCCGGCACAA AAAACGGAAA ACGATGAAGC GCAGCGGAGC GAAGCTGCTT GCGCCCGTGG TCGTCGCGGC CGCCGCCGCG GTCGCGGCCC GCCCCGGCTG GGCGCAGGCC GCGCCGTACC CGGATCCGGG CCGGCGCGGC GATCCGGCGA GTTGGCGCAC GCCGGAATTC ACGAACGCGT GGGGGCTCGG CGCGATGCAC GCCGAGTATG CATACGCGGC CGGCTATACC GGCGCGAACG TCGCGATCGG CGTGCTGGAC TCCGGCTACT ACGCGCAGCA TCCGGAACTG CCCGACAGCC GCTTCGTTCC GGTGACGGCC GCGGGCGTGT CCGGCGTGCT GAATCCGAAC AACAACAATC ACGGCACGCT GGTGAGCGGC GTCGTCGGCG GCGCGCGCGA CGGTGTCGGC ATGCACGGCG TCGCACCCGA CGCGACGGTG TACGAAGGCA ACACGAACGC GACCGACGGC TTCCGGTTCG GCGTATCGGA TCCGAAGTTT CCCGCGTCGG ATGCGAAGTA TTTCGCCGAG GCCTACGATG CGCTCGCCGC AAAGGGCGTG CGGATCATCA GCAACAGCTG GGGCTCGCAG CCGGCCAACG AGAACTACAG CACCCTGAAC AAACTCACCG ATGCCTACAA GCTGCACGAG GCGGTGCGCA CGGCGACCGG CCGGGGCACG TGGCTCGACG CGGCGGCGAA GGTGTCGCGC GACGGCGTGA TCAACAACTT CAGTTCGGGC AACACCGGCT ACGACAACGC GAGCTTGCGC GGCGCGTATG CGTACTTCCA CCCCGAACTC GAAGGGCACT GGATGACGAC GACGGGCTAC GACCAGTTGA GCGGCCAGGT CTACAACCAA TGCGGGATCG CGAAGTGGTG GTGCGTGATG GCGCCCACGG GCGTGCCGTC GACGTCATAT TCGGGCGGCG CGGCGGCGCC GACCGGGGCG ACCTACGCGA ACTTCAACGG CACGTCGGCC GCCGCGCCGC ACGCGTCGGC GGCGCTCGCG CTGATCATGG AGCGCTTTCC GTACATGACG AGCGAGCAGG CGCTGTCGGT GCTGTTCACG ACCGCGCAGA ACATGGAGCC GGACCCGAGC CGGCCGGACT ACACGAACAA CGGGCTGTTC TCGACCGTGC ATCCGGCGAA GCCCGGCGCG TCGGGCGTGC CGAACGCGTT CGGCGGCTGG GGGCTCGTCG ACCTGCGCCG GGCGATGAAC GGCCCGGGCC AACTGCTCGG CACGTTCGAC GCGGCGCTGC CTGCGGGCAC CGCCGACGTG TGGTCGAACG ACATCTCCGA CGTCGCGCTC GCCGCGCGCA AGCGCGAAGA CGACGCCGAG CACCGCGCGT GGCTCGACAC GCTGAGGACG AAGGGATGGG AGCACGGGCT GCCCGCCGGC GCGAGCAATG GCGACCGGAT CGACTATGCG CTCGGCGTCG CGCGCGAAAC CGCGTATCAG GCGCGCGAGT ATCAGGGCAG TCTCGTGAAA TCGGGCGGCG GCACGCTGAC GCTCGCCGGC GCGAACACCT ATCGCGGGCC CACGACGGTC GACGGCGGCG AATTGAGGAT CGACGGCTCG ATCGCCGCGC GCGCCGTCGT CAATCCGGCG GGCCGGCTCA CGGTGAACGG CCGCGCGGCC GACATCGCGG TCAACGGCGG CGTGGCGACG ATCGCCGGGA CGAGCGCGAA CCTGTCGATC GACCGGCAGG GCCGGGCCGC CGTGACAGGG ACGACGGCGG ACGTGCGCGT CGCGAGCGGC TTTGCATCGC TCGGCGGCAC GAGCGGCAAC GTCGCGGTGG GGGCGCTCGG CGTCGCCGCG ATCACGGGCC GCACGGCCGA CGTGGCGGTC GACGGCGGCC GCGCGTCGCT CGACGGCGCG AGCGGCAACG TCGCGGTCGG CAACGGCGGC GTCGTGAGCG GCAGCGGCAC GGTGCGCACG CTCACGGCGG CCGCGAACGG CACGGTCGCG CCCGGCCATT CGGTCGGTAC GCTGACGGTG TCGGGCGACG TGCGCTTCGC GCCGGGTTCG ATCTACGCGG TCGAGGTGTC GCCGGGCGGC GCGGGCGACC GGATCGTCGC GGGCGGCCGC GCGCAAATTG ACGGCGGCGC GTTGGCGCTC GCGCTCGAGA ACACGCCGCC GCCGCTCACG CCCGAGCAGT CGCGCTCGGT GCTCGGCCGT CGCTTCGAGA TCCTGAATGC GGCGGGCGGC GTGGCCGGCC GCTTCGATGC GCCGAGCGGC TATCTGTTCG TCAATCCGGT GCTCGCCTAT GGCCCGACGA CCGTGAGCCT CACGATCGAT CGTAACGCGA CGCCGTTCGC AAGCGTCGCG CGGACCGCGA ACGAGCGCGG CGTCGCCGAT GCGCTCGAAA CGGCGGACCC GGGCAGCGCG GTTTACAACA GCGTGCTGTT CGCGGCGTCC GCGCAGGCGC CGCAGGCGAC GCTCGCGCAA CTGACGGGCG AGATCTATCC GGCCGCCTAC GCGGCGCTCG TCAACGAAAG CCGGCAAGTG CGCGAAACGG CGCTCGAGCG CCTGTGGACG GCGCGCGGCG CGCCGGGCCG CGCCGGCGCC TGGGCGCGGC TGCTCGGCGC GTGGGGCAGC GCGCGCGGCG GCGACGTGAA CGGCTACACG AGCTCGACGG GCGGCTTCCT CGCGGGCGCG GACGCGGCGC TGCTCGACAG CGTGCGGGCG GGCGGCTTCG CCGGCTACAG CCACACCGGC GTGAACCTGA GGAATCAGCC GTCGTCCGCG TCGTTCGACA GCTTCCATCT CGGCGCATAC GCGGGGTGGC AGCCCGGCGC ACTCGGCGTG CGAATCGGCG CGGCGCATGC GTGGCATCGC GGCGGTGTCG ATCGCGCGGT GCAATATGGC GCGGTTGCCG AGAACGAAAC GACGGCGCTG CACGCGGAAA CGACGCAGGT GTTCGGCGAG GCCGGCTATC GGTTCGCGCT CGATGGCGCC GCGACGCTCG AGCCGTTCTT CGGCGTCGCG TATGTGCATC TGAAGAACCA GGGGACGACG GAAACCGGCG GCGCGGCGGC GTTGCGCGTG CGGCAAGGCA ATCACGACGT GACGTTCTCG ACGCTCGGCG TGCGCGGCGA AACGCGGCTT GGCCTGACGT CGCGACTGCA GTTGACGCTG CAGGGCAGCG CGGGCTGGCA GCATGCGCTG ACGGACGGGC AGCCGAGCGG CACGCTCGCG TTCGCGACGG GGAGCGACAC GTTCACCGTG TCGAGCGTGC CGGTTGCGAA GGATGCGGCG GTGCTGAACG TGGGCGCCGG GCTCGAGCTC GGCAAGAACG GATGGCTGCG CGTCGGCTAT TCCGGCTCGC TCGCGAGCCG TCAGTCCGAG CACGCGGTGC AAGGCAGCCT GCACTGGAAG TTCTGA
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Protein sequence | MLMTRHKKRK TMKRSGAKLL APVVVAAAAA VAARPGWAQA APYPDPGRRG DPASWRTPEF TNAWGLGAMH AEYAYAAGYT GANVAIGVLD SGYYAQHPEL PDSRFVPVTA AGVSGVLNPN NNNHGTLVSG VVGGARDGVG MHGVAPDATV YEGNTNATDG FRFGVSDPKF PASDAKYFAE AYDALAAKGV RIISNSWGSQ PANENYSTLN KLTDAYKLHE AVRTATGRGT WLDAAAKVSR DGVINNFSSG NTGYDNASLR GAYAYFHPEL EGHWMTTTGY DQLSGQVYNQ CGIAKWWCVM APTGVPSTSY SGGAAAPTGA TYANFNGTSA AAPHASAALA LIMERFPYMT SEQALSVLFT TAQNMEPDPS RPDYTNNGLF STVHPAKPGA SGVPNAFGGW GLVDLRRAMN GPGQLLGTFD AALPAGTADV WSNDISDVAL AARKREDDAE HRAWLDTLRT KGWEHGLPAG ASNGDRIDYA LGVARETAYQ AREYQGSLVK SGGGTLTLAG ANTYRGPTTV DGGELRIDGS IAARAVVNPA GRLTVNGRAA DIAVNGGVAT IAGTSANLSI DRQGRAAVTG TTADVRVASG FASLGGTSGN VAVGALGVAA ITGRTADVAV DGGRASLDGA SGNVAVGNGG VVSGSGTVRT LTAAANGTVA PGHSVGTLTV SGDVRFAPGS IYAVEVSPGG AGDRIVAGGR AQIDGGALAL ALENTPPPLT PEQSRSVLGR RFEILNAAGG VAGRFDAPSG YLFVNPVLAY GPTTVSLTID RNATPFASVA RTANERGVAD ALETADPGSA VYNSVLFAAS AQAPQATLAQ LTGEIYPAAY AALVNESRQV RETALERLWT ARGAPGRAGA WARLLGAWGS ARGGDVNGYT SSTGGFLAGA DAALLDSVRA GGFAGYSHTG VNLRNQPSSA SFDSFHLGAY AGWQPGALGV RIGAAHAWHR GGVDRAVQYG AVAENETTAL HAETTQVFGE AGYRFALDGA ATLEPFFGVA YVHLKNQGTT ETGGAAALRV RQGNHDVTFS TLGVRGETRL GLTSRLQLTL QGSAGWQHAL TDGQPSGTLA FATGSDTFTV SSVPVAKDAA VLNVGAGLEL GKNGWLRVGY SGSLASRQSE HAVQGSLHWK F
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