| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0960 |
|---|
| Symbol | bpsI |
|---|
| ID | 4890222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 909541 |
|---|
| End bp | 910152 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640147233 |
|---|
| Product | autoinducer synthase BpsI |
|---|
| Protein accession | YP_001078152 |
|---|
| Protein GI | 126446861 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACTT TCGTTCATGG CGACGGGCGC CTGCCGAGCG ACTTGGCGGC TGATCTGGGC
CTTTATCGGC ACGGAGTTTT CGTCGAGCAG CTCGGCTGGA AACTGCCGTC GGCAAGCGAA
GGGTTCGAGC GGGATCAGTA CGATCGCGAC GATACCGTCT ATGTGTTCGC CCGCGACGAC
GACGGGGAAA TCTGCGGCTG CGCCCGGCTG CTGCCGACGA CCCGCCCGTA TCTGCTGAAG
GAACTGTTCC CGACGCTGGT CGCGCAAGAC ATGCCGTTGC CGCAATCCGC CGCCGTCTGG
GAATTGTCGC GCTTCGCCGC GAACGCCGAG GATCCGGCCG GGGGCGGCAA CCCGGCCTGG
GCGGTGCGGC CGATGCTCGC CGCCGTCGTC GAGTGCGCCG CGCGGCTTGG CGCGAAGCAA
CTGATCGGCG TGACGTTTCT GAGCATGGAG CGCCTGTTCC GCCGGATCGG CGTGCACGCG
CACCGGGCGG GGCCCGCGCA GCAGATCGAC GGGCGCATGG TCGTCGCGTG CTGGATCGAC
CTCGACGCGC AAACGCTCGC CGCGCTCGAT CTCGACCCGC TGCTGTGCGC GCCGCCCGCC
GAAGCCGCCT GA
|
|---|
| Protein sequence | MRTFVHGDGR LPSDLAADLG LYRHGVFVEQ LGWKLPSASE GFERDQYDRD DTVYVFARDD
DGEICGCARL LPTTRPYLLK ELFPTLVAQD MPLPQSAAVW ELSRFAANAE DPAGGGNPAW
AVRPMLAAVV ECAARLGAKQ LIGVTFLSME RLFRRIGVHA HRAGPAQQID GRMVVACWID
LDAQTLAALD LDPLLCAPPA EAA
|
|---|
| |