| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0529 |
|---|
| Symbol | trpB |
|---|
| ID | 4890655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | + |
|---|
| Start bp | 476074 |
|---|
| End bp | 477267 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640146805 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001077730 |
|---|
| Protein GI | 126446869 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAACC TTCCCGATGA TCGCGGCCAT TTCGGCCCAT ATGGCGGCGT GTTCGTCGCC
GAAACGCTGA TTCACGCGCT CGACGAGCTG CGTGCCGCGT ACGAGAAATT CAAGAACGAC
CCCGAGTTCG TTGCCGAATA CAACCGTGAG CTGAAGCACT TCGTCGGCCG TCCGTCGCCG
ATCTATCACG CGCAGCGCTG GAGCGAGACG CTCGGCGGCG CGCAGATCTA CCTGAAGCGC
GAGGACCTGA ACCACACGGG CGCGCACAAG GTGAACAACG TGATCGGCCA GGCGCTGCTC
GCCAAGCGCA TGGGCAAGCG GCGCGTGATC GCCGAGACGG GCGCGGGCCA GCACGGCGTC
GCCACCGCGA CGATCTGCGC GCGCTTCGGC ATGGAGTGCG TCGTCTACAT GGGCGCCGAG
GACGTGCGCC GGCAGGCCGC GAACGTCTAC CGGATGAAGC TGCTCGGCGC GACCGTCGTG
CCCGTCGAAT CCGGCTCGCG CACGCTGAAG GATGCGTTGA ACGAGGCGAT GCGCGACTGG
GTCACGAACA TCGAGCGCAC GTTCTACATC ATCGGCACGG TGGCGGGCCC GCATCCGTAT
CCGATGATGG TGCGCGACTT CCAGCGCGTG ATCGGCGACG AATGCAAGGT GCAGATGCCC
GAGCTCGCCG GCCGGCAGCC CGACGCGGTG ATCGCCTGCG TCGGCGGCGG CTCGAACGCG
ATGGGCATCT TCTACCCGTA CATCGACGAC GCGGCCGTCC AATTGATCGG CGTCGAGGCG
GCGGGCGACG GGCTCGACAC CGGCCATCAC GCGGCGTCGC TGATCGCCGG CAGCCCGGGC
GTGCTGCACG GCAACCGCAC GTATCTGCTG CAGGACGACG ACGGCCAGAT CATCGAGACG
CATTCGGTAT CGGCCGGCCT CGACTATCCG GGCGTCGGCC CCGAGCATGC CTGGCTGAAG
GACAGCGGCC GCGCGCAGTA CGTCGGGATC ACCGACGAAG AGGCGCTGAA GGCGTTTCAC
GACTGCTGCC GGATCGAGGG GATCATTCCC GCGCTCGAAT CGAGCCACGC GATCGCCTAC
GGCGCGAAGC TCGCGCCGAC GCTGCCGAAG GACAAGATCC TCCTCGTCAA CCTGTCGGGG
CGCGGCGACA AGGACATGCA CACGGTCGCC GAGCGATCGG GCATCACGCT CTGA
|
|---|
| Protein sequence | MYNLPDDRGH FGPYGGVFVA ETLIHALDEL RAAYEKFKND PEFVAEYNRE LKHFVGRPSP
IYHAQRWSET LGGAQIYLKR EDLNHTGAHK VNNVIGQALL AKRMGKRRVI AETGAGQHGV
ATATICARFG MECVVYMGAE DVRRQAANVY RMKLLGATVV PVESGSRTLK DALNEAMRDW
VTNIERTFYI IGTVAGPHPY PMMVRDFQRV IGDECKVQMP ELAGRQPDAV IACVGGGSNA
MGIFYPYIDD AAVQLIGVEA AGDGLDTGHH AASLIAGSPG VLHGNRTYLL QDDDGQIIET
HSVSAGLDYP GVGPEHAWLK DSGRAQYVGI TDEEALKAFH DCCRIEGIIP ALESSHAIAY
GAKLAPTLPK DKILLVNLSG RGDKDMHTVA ERSGITL
|
|---|
| |