Gene BMA10247_A0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A0481 
Symbol 
ID4891123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand+ 
Start bp430085 
End bp431185 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID640146758 
Productspermidine/putrescine ABC transporter, ATP-binding protein 
Protein accessionYP_001077683 
Protein GI126447057 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.155337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCG ATGATGCGAT CGTCAGCTTT CGCGGCGTGC GCAAGACTTA CGACGGCGAG 
ACGCTCGTCG TCAAGGCGCT GGATCTGGAT ATCCGGCGCG GCGAATTCCT GACGCTGCTC 
GGGCCGTCCG GCTCAGGCAA GACCACTTGC CTGATGATGC TCGCGGGCTT CGAATTCCCG 
ACGGGCGGCG AGATTCGCCT GGACGGCGAA CTGCTGAACA ACGTGCCGCC GCACAAGCGC 
AACATCGGCA TGGTGTTTCA AAACTATGCG CTCTTTCCCC ATCTGAGCGT CGAGCAGAAC 
GTCGACTATC CGCTGAACGT GCGGCGGATG CCCGCCGCGG AACGCGCCGC GCGCGTCGCG 
GCGGCGCTGG CGATGGTGCA GATGGAGCGC TTCGCGAAGC GCTATCCGGC GCAACTCTCG 
GGCGGGCAGC AGCAGCGCAT CGCGCTCGCG CGCGCACTCG TGTTCGAGCC GAAGCTCGTG 
CTGATGCACG AGCCGCTCGG CGCGCTCGAC AAGCAGTTGC GCGAACACAT GCAGTACGAA 
CTGAAGGCGT TGCACGAAAA GCTCGGCCTG ACCTTCGTCT ACGTGACGCA CGATCAGGGC 
GAGGCGCTGA CGATGTCCGA TCGCGTCGCG GTGTTCGACA AGGGCATCGT GCAACAGCTC 
GACACCGTCG ATCGGCTGTA CGAATCACCG TGCAACGAGT TCGTCGCGAA TTTCATCGGC 
GACAGCAATC GGTTGCGCGG CACCGTCGCG AGCGTGCACG GCGAGTTTTG CGAATTCCGG 
CTCGAAGACG GCACGCGCCT CGTCGGCCTG AACGCGGGCA ACGCGCAAGC GGGCGCGTCG 
GGCGTCGCCT GCATTCGTCC CGAGCGGATG AGCGTCGCGC CGGGCAGCGG CCGCGCGGCG 
AACGGCGCGG CGAACGCGCT AGCCGGCGAA GCGCGCAGCC TCATCTACTT CGGCGATCAC 
GTGCGGATGC GCTGCGCGTT GCCCGGGCAG GACGAATGCT TCGTCAAGGT GCCGCTCGGC 
ACCGGCGCGC TCGATGCGTT CGCGCCCGGC GTGCCGATCT CGCTCGAGTT TCAGCCCGAG 
CATCTGCGGG TCTTCGCATG A
 
Protein sequence
MKTDDAIVSF RGVRKTYDGE TLVVKALDLD IRRGEFLTLL GPSGSGKTTC LMMLAGFEFP 
TGGEIRLDGE LLNNVPPHKR NIGMVFQNYA LFPHLSVEQN VDYPLNVRRM PAAERAARVA 
AALAMVQMER FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMHEPLGALD KQLREHMQYE 
LKALHEKLGL TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDRLYESP CNEFVANFIG 
DSNRLRGTVA SVHGEFCEFR LEDGTRLVGL NAGNAQAGAS GVACIRPERM SVAPGSGRAA 
NGAANALAGE ARSLIYFGDH VRMRCALPGQ DECFVKVPLG TGALDAFAPG VPISLEFQPE 
HLRVFA