Gene BMA10247_A0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A0388 
SymboloppD 
ID4889192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand+ 
Start bp343945 
End bp344934 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID640146666 
Productoligopeptide ABC transporter, ATP-binding protein OppD 
Protein accessionYP_001077591 
Protein GI126447739 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.440063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAC TCGAAGTCAA GGACCTCGGC GTGCGCTTCA CGCGCCGTGA AGGCGAGCCC 
GTCGACGCGG TATCGGGCGT GTCGTTCTCG CTAGAGGCGG GCAGGACGCT CGGCATCGTC 
GGCGAATCGG GCTCCGGCAA GAGCCAGACG GTGATGGCGC TGCTCGGGCT GCTCGCGGGC 
AACGGATCGA CCTCGGGCGA GGCGCTGTTC GACGGCGAGA ACCTGCTGCG GATGAACACG 
CGGCAGCTGA ACGCGGTGCG CGGCGACCGG ATCGGGATGA TCTTTCAGGA CCCGATGACC 
TCGCTCAATC CGTTCCTGAC GATCGAGCGG CAGATGACCG AGAGCCTGCA GCTTCACCGG 
AAGATGTCGC GCAAGCACGC GCTCAAGCGG GCGATCGACG CGCTCGAGGT GGTCAGGATT 
CCCGATGCGG CGCGCCGGAT CCGGATGTAT CCGCACGAGT TCTCGGGCGG CATGCGCCAG 
CGCGTGATGA TCGCGATGGC GCTGCTGCTC GAACCGGAGA TCCTGATCGC CGACGAGCCG 
ACCACCGCGC TCGACGTCAC CGTGCAGGCG CAGATCATCG AGCTGCTGCG CGAGCTGAAC 
CGCGAGCGCG GCACGTCGAT CGTGCTGATC ACGCACGACA TGGGCGTGGT CGCGGGGCTC 
GCCGACGACG TGATGGTGAT GTACGCGGGC CGCACGGTCG AATACGCGAG CGCCGACGCG 
ATCTTCTCCG CGCCGTCGCA TCCGTACACG ATCGGCCTGT TGAACGCGTT GCCGCGTCTC 
GACGCGCCCG ACGACGCGCC GCTCATCGCG ATTCCCGGCA ATCCGCCGCT GCCCGGCCAG 
GGGCTGCTCG GCTGCGCATT CGCGAAGCGC TGCGCTCATG CATCGGAGCG ATGCGGCGTC 
GAGCGCCCCG ATCTGATCGC CTATTCGGAC GCGGGCGCCG TGCGCGCGTG TCATCGGCCC 
ATTGCGGAAA TCACGGGAGG GCTGCGATGA
 
Protein sequence
MALLEVKDLG VRFTRREGEP VDAVSGVSFS LEAGRTLGIV GESGSGKSQT VMALLGLLAG 
NGSTSGEALF DGENLLRMNT RQLNAVRGDR IGMIFQDPMT SLNPFLTIER QMTESLQLHR 
KMSRKHALKR AIDALEVVRI PDAARRIRMY PHEFSGGMRQ RVMIAMALLL EPEILIADEP 
TTALDVTVQA QIIELLRELN RERGTSIVLI THDMGVVAGL ADDVMVMYAG RTVEYASADA 
IFSAPSHPYT IGLLNALPRL DAPDDAPLIA IPGNPPLPGQ GLLGCAFAKR CAHASERCGV 
ERPDLIAYSD AGAVRACHRP IAEITGGLR