Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0283 |
Symbol | linX |
ID | 4889518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 245050 |
End bp | 245829 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640146562 |
Product | short chain dehydrogenase |
Protein accession | YP_001077488 |
Protein GI | 126446626 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.879782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGCCGC GCCTGGCCGG CAAGCGCGCG TTCATCACCG GCGCTGCGGG CGGCCTCGGG CGCGCGATCG CGCGCCGGAT GGCCGAGCAG GGCGCGCAGG TGTTCTTGAC CGACATCGTC GACGCGGCCG TGCTCGAGGC GTTCGCGGCC GAGCTCAACG ATACGGCCGG CGAGCGCATT GCGTGGGCGG CCGTGCAGGA CGTCGCCGAC GAAGCGCAGT GGGCGTCGCG CCTTTCGCAG GCGGCAGACG CGATGGGCGG GCTGTCGGTG CTCGTGCACA ACGCGGGCGT CGGCTCGTTC GGCGCGATCG GGCAGATCGC GCGCGACGAG TGGCGGCGCG TGATGGCGAT CAACGTCGAG AGCATCGTGC TCGGCACGAA GCATGCGCTG CCGTATCTGG AGGCGGGCGC GCCCGCGTCG ATCGTCAATA TCTCGTCGGT CGCCGCGTTC AAGCAGGAGC CCGACTACAC CGCGTACAAC GCGTCGAAGG CGGCGGTCGC GTCGCTCACG AAGTCGATCG CGGTGGATTG CGCGCGCCGG CAGACGGAGG TGCGCTGCAA CTCGATCCAT CCGTCGTTCA TCATGACGGG CATCGTCGCG CCGATCGTCC GGCTGGTCGG CGAGAAGGAA GCCGCGCGCA AGCTCGCGCG CGGCGTGCCG ATGCGCCGGC TCGGCGAGCC CGACGACGTC GCGCATGCGG CCGTCTATCT CGCGTCCGAC GAGAGCCGCT ACGTGACGGG CGCGGAGCTC GTGATCGACG GCGGGATGTG CGCGGTCTGA
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Protein sequence | MAPRLAGKRA FITGAAGGLG RAIARRMAEQ GAQVFLTDIV DAAVLEAFAA ELNDTAGERI AWAAVQDVAD EAQWASRLSQ AADAMGGLSV LVHNAGVGSF GAIGQIARDE WRRVMAINVE SIVLGTKHAL PYLEAGAPAS IVNISSVAAF KQEPDYTAYN ASKAAVASLT KSIAVDCARR QTEVRCNSIH PSFIMTGIVA PIVRLVGEKE AARKLARGVP MRRLGEPDDV AHAAVYLASD ESRYVTGAEL VIDGGMCAV
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