Gene BMA10247_A0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A0260 
SymboldehII-1 
ID4889818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand+ 
Start bp223961 
End bp224971 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content71% 
IMG OID640146539 
Producthaloacid dehalogenase, type II 
Protein accessionYP_001077465 
Protein GI126446217 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGATG AAGCCGGCCT CTATTTCTCG CCGGGCATGC AGGCAGGCGG TTCGCCGATA 
ATGTCGGACG GCAGAGGTGC GTTTCTTTCG GACGTGCAGG CGCGGCGGTC CGCGCGTGGC 
GGATCGTACG GGGCGGTCCT GCGTTCGTCG CCCAGGCGCG CGCCGCCGGC CGGCGCGCGG 
CTCGCCGCGG CGTTCGGCCG GGCGCGCGCG TTCGGCGTCG GGCCGGTGCG AGCCGCCGAC 
GGCGGCCGCT GCATCCTGAA ACGTCATCCC ACGACTCAGG AGAACATCAT GCAGACGCTT 
GGCGTGAAGG CATTGGTATT CGACGTGTTC GGCACCGTGG TCGACTGGCG TTCCGGCGTC 
ATTCGCGACG CGACGCCGTT CCTCGCGAAG TACGGCGGCG CGGGAGCCGA TCCGGCCGCG 
TTCGCGGATG CATGGCGCGC GGGCTATTCG CCCGCGATGG AGGAGGTGCG CAGCGGCCGC 
CGGCCGTTCA CGCGGCTCGA CGTGCTGCAC CGGGAGAATC TCGACGCGCT GCTGCCCGCG 
TTCGGCATCG ATCGCGCGAG CGTGGCCGAC GCCGATCTCG ACGCGCTGAA CCTCGCATGG 
CACCGGCTCG ATCCGTGGCC CGATTCGGTC GCGGGGCTCA CGCGGCTGAA GGCGCATTAC 
ATCATCGCGC CGCTGTCGAA CGGCAACGTG ATCCTGATGA TCGACATGGC CAAGCGCGCG 
GGGCTGCCGT GGGACGCGAT CCTCGGCGCC GAGGTGGCGC AGGCGTACAA GCCGACGCCC 
GAAGCGTACC TGCGCACGGC CGATATCCTC GCGCTGCGTC CGGATGAGGT GTGCCTCGTC 
GCCGCGCACA ACGGCGACCT CGCGGCCGCG CGGCGCTGCG GCTATCGCAC CGCGTTCGTC 
GCGCGAGCGC GCGAGCATGG TCCCGCGCAG ACCACCGATC TGCGCGCGGA GCAGGATTGG 
GACGTCGTCG CGGCCGATTT CATCGAGCTC GCGCAGCGCT TCGGCGCGTG A
 
Protein sequence
MRDEAGLYFS PGMQAGGSPI MSDGRGAFLS DVQARRSARG GSYGAVLRSS PRRAPPAGAR 
LAAAFGRARA FGVGPVRAAD GGRCILKRHP TTQENIMQTL GVKALVFDVF GTVVDWRSGV 
IRDATPFLAK YGGAGADPAA FADAWRAGYS PAMEEVRSGR RPFTRLDVLH RENLDALLPA 
FGIDRASVAD ADLDALNLAW HRLDPWPDSV AGLTRLKAHY IIAPLSNGNV ILMIDMAKRA 
GLPWDAILGA EVAQAYKPTP EAYLRTADIL ALRPDEVCLV AAHNGDLAAA RRCGYRTAFV 
ARAREHGPAQ TTDLRAEQDW DVVAADFIEL AQRFGA