| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0130 |
|---|
| Symbol | deoC |
|---|
| ID | 4890937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | + |
|---|
| Start bp | 109794 |
|---|
| End bp | 110576 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640146410 |
|---|
| Product | deoxyribose-phosphate aldolase |
|---|
| Protein accession | YP_001077336 |
|---|
| Protein GI | 126445703 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTT CGTTGAATCG CAACCAGTTG ACCGAAGCGG CGCTCAAGGC GCTGCATCTG
ATCGATCTCA CGTCGCTGAA CGACGACGAC ACCGAAGAGA GGATCGCCTC GCTCGCCGCG
TCGGCCGATA CGCCGGTCGG CACGCCCGCC GCGCTGTGCG TGTATCCGCG CTTCGTCGGC
GCCGCGCATG CGGCGCTCGC GCGGCACGGG CTCGTGCTGC CCGTCGCGAC CGTCACGAAT
TTTCCGCACG GCGCGGCCGA TCCGGATGCG GCCGCGCGCG AGACGGCCGA TGCGCTCGCG
CGCGGCGCGG ACGAAATCGA TGTGGTGTTT CCGTATCGCG CGCTCATCGA CGGCGACGAA
CGGGTCGGCC GCGAACTCGT CGCGCAGTGC CGCGCGGCGG CGGGCGCGCA GTGCCTGAAG
GTGATCCTCG AGACGGGCGA GTTGCGCGAC GCGGCGGCGA TCCGCCGCGC GAGCGAGATC
GCGATCGAGG AGGGCGCGGA TTTTCTGAAG ACGTCGACGG GCAAGGTCGC GGTGAACGCG
ACGCTCGACG CGGCGGCCGC GATGCTCGCG ACGATCCGCG TCGCGGGCCG CATGGTCGGC
TTCAAGGCGG CGGGCGGCGT GCGCACCGCG CAGGACGCGG CGCAGTACCT GTCGCTCGCG
CAGCGCGAGC TCGGCCCGGG CTATCTGACG AGCGCGACGT TTCGCTTCGG CGCGTCGGGG
CTGCTCGGCA ATCTGCTCGA GACGCTCGGG CACCGGGCAG GCGCGACGCG CGGCGCGTAT
TGA
|
|---|
| Protein sequence | MELSLNRNQL TEAALKALHL IDLTSLNDDD TEERIASLAA SADTPVGTPA ALCVYPRFVG
AAHAALARHG LVLPVATVTN FPHGAADPDA AARETADALA RGADEIDVVF PYRALIDGDE
RVGRELVAQC RAAAGAQCLK VILETGELRD AAAIRRASEI AIEEGADFLK TSTGKVAVNA
TLDAAAAMLA TIRVAGRMVG FKAAGGVRTA QDAAQYLSLA QRELGPGYLT SATFRFGASG
LLGNLLETLG HRAGATRGAY
|
|---|
| |