Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_3364 |
Symbol | |
ID | 4894128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 3322254 |
End bp | 3324209 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640152011 |
Product | putative lytic murein transglycosylase |
Protein accession | YP_001082880 |
Protein GI | 126450894 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACCA GCCTTTTTCG AGTATATCGC GCGGTCGCGG CGCCCCTCGT CGCGGTCGCG CTGGCCGCCG TGACGGCCGC CTGCGCCGCG CAGACCGCCG ACGAAGCGTC GTCGAACGAC GATCGGGTGT TCGTCCAGCT GCGCGAGGCC GCGCGCAGGA ACGATCCGGT GCGCGCCGCG CAGCTCGCCG CGCTGATCCC GAATTATCCG GCGCCGTCAT ATCTCGAGTA CTTCCAGATC AAGCCGCAGT TGTTCGATTC GGCGGGCCAT GCGCGCCTTG ACGCGCCGGA CGCGCCGGTG CTGTCGTTCC TGTCGCGCTA CGACGGCCAG GCGATCGCCG ACCGCATGCG CAACGATTAC CTGCTCGTGC TCGGCGCGCG CCATGACTGG CGCGCCTTCG ACGAGCAGTA CAAGCGCTTC GTGCTCGACG ACGACACGCA GGTCAAGTGC TATGCGCTCG AATCGCGCGC ATCGCGTGGC GAGAACGTCG CGGACATGGC GCGCGAGCTG CTCGTCGAGC CGAAGTATTA CGGCGACGCG TGCGTCGACC TCATCACGGC GCTCGCGACG AACAAGCAGT TCTCGAGCGA CGACGTGTGG GCGCAGGTGC GCCTCGCGTA CGAGCAGAAC TACACGACGC TCGGCGGCAA GATTGCCGAC GCGCTCGGCC CGCGCCCGGT CGGCTTCGAT CAGGTGACGA GCGCGCCGCC GCTGTTCCTC GCGCGCGGCG TGGGCTCCGA CGCGACGTCG CGGCAACTCG CGCTCGTCGC GATCACGCGC ATGGCGCGCA ACGATCCGGA AGCGGCGGCG GGGCAGCTCG CGTCGCTCGC GTCGACGCTG TCGGCGGCCG AGCAGGCGAT CGGCTGGGGC GAGATCGGCT ATCAGGCGAC GGTCAAGCGG CTGCCGCAGG CCGCGTCGTG GTACCGGAAA TCGATGGACG CGCCGCTGTC GAATCCGGCG TACGAATGGC GTGTGCGCGC GGCGCTGCTC GCCGGCGACT GGCCGATGGT GCGCCGCTCG ATCGAGCAGA TGCCCGAGCG GCTGCGCGAC GACACGGCAT GGATCTACTG GCGCGGCCGC GCGCTGAAGG AGAGCGGCGA CACCCTCAAG GCGAACCAGG AGTTCGAGCG CATCGCCGGG CAGTTCAACT TCTACGGGCA GCTCGCGGGC GAGGAGCTCG GCCAGAAGAC GACGATCCCG CCGCGCACGA AGGTGACGGA CGCCGAGATC GACGCGATGA GCAAGGTGCC GGGCTTCGCG CTCGCGCAGC GCTTCTACGC GCTGAACCTG CGGCTCGAAG GCAACCGCGA ATGGAACTGG CCGCTGCGCG GGATGACCGA TCGGCAACTG CTTGCGGCGG CCGAGTACGG CAAGCGCGTC GACCTGCTCG ACCGCACGGT CAACACCGCC GATCGCACGA CGGCCGAGCA CGATTTCTCG CTGCGCTATC CGTCGCCGTA TCGCGACATC GTCGAGCGCT ACGCGCGGAC CAACGGGCTC GACGTCGAAT GGGCGTACGG GCTGATCCGC CAGGAATCGC GCTTCATCAC GAACGCGCGC TCGACGGTGG GCGCGGGCGG CCTGATGCAA CTGATGCCGG CGACCGCGCA ACTCGTCGCG AAGAAGCTCG GCCTCGGCAC GGTCTCGCGC GCGCAGATGC ACGACATCGA TACGAACGTG CAGCTCGGCA CCTGGTATCT GTCCGACATC TACCAGAAGT TCGACGATTC GGCCGTGCTC GCGACGGCCG GCTACAACGC CGGCCCGGGC CGGCCGGCCC AATGGCGGCA GGTGCTCACG CGCCCCGTCG AAGGCGCGAT CTTCGCGGAG ACGATCCCGT TCAACGAGAC GCGCGAATAC GTGAAGAACG TGCTGTCCAA CGAGACGTAC TACGCGGCGC TCTTCGAGAA GAAGCCGCAA TCGCTGAAGG CTCGCCTCGG CTTCATCGCG CCGTAA
|
Protein sequence | MSTSLFRVYR AVAAPLVAVA LAAVTAACAA QTADEASSND DRVFVQLREA ARRNDPVRAA QLAALIPNYP APSYLEYFQI KPQLFDSAGH ARLDAPDAPV LSFLSRYDGQ AIADRMRNDY LLVLGARHDW RAFDEQYKRF VLDDDTQVKC YALESRASRG ENVADMAREL LVEPKYYGDA CVDLITALAT NKQFSSDDVW AQVRLAYEQN YTTLGGKIAD ALGPRPVGFD QVTSAPPLFL ARGVGSDATS RQLALVAITR MARNDPEAAA GQLASLASTL SAAEQAIGWG EIGYQATVKR LPQAASWYRK SMDAPLSNPA YEWRVRAALL AGDWPMVRRS IEQMPERLRD DTAWIYWRGR ALKESGDTLK ANQEFERIAG QFNFYGQLAG EELGQKTTIP PRTKVTDAEI DAMSKVPGFA LAQRFYALNL RLEGNREWNW PLRGMTDRQL LAAAEYGKRV DLLDRTVNTA DRTTAEHDFS LRYPSPYRDI VERYARTNGL DVEWAYGLIR QESRFITNAR STVGAGGLMQ LMPATAQLVA KKLGLGTVSR AQMHDIDTNV QLGTWYLSDI YQKFDDSAVL ATAGYNAGPG RPAQWRQVLT RPVEGAIFAE TIPFNETREY VKNVLSNETY YAALFEKKPQ SLKARLGFIA P
|
| |