Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_2934 |
Symbol | |
ID | 4894334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 2891825 |
End bp | 2893645 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640151582 |
Product | TPR domain-containing protein |
Protein accession | YP_001082454 |
Protein GI | 126448388 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.152208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTGC CCTTGAAGCT GTCCCAGAAG CGCCTTGCCG CTGCGCGCGG CCCGCGCGCC GTTCCGGTGC GCCGCGCGAT CGGCGCCGCG CTCGTCGCGG CGTGGGCGCT CGCCGCGCTC CCCGCTCACG CGCAGGACGA CGCAGGCGAC GACGCCCCCC AGGCCGCGTT CGCGTCGGCG CTACCGGAAG AGCAGAAGGA TCTGCCGAAC GTCGCGCTGA CGAGCCAGAT CGTCTACCAG GTGCTCGCGG CCGAGGTCGC GCTGCAACGC AGTCTTCCCG CGCCAGCCTA TCAGACCTAC CTCGCGCTCG CGCGCGACAC GCGCGATCCG CGGATGGCGC AGCGGGCGAC CGAGATCGCG CTCGCCGCGC AGAGCCCGGC GGACGCGCTG ACGGCCGCCA ATCTGTGGCG CGAGTATTCG CCGGGTTCGC AGCGCGCCGC GCAGGTCGAC GCCGCGCTCC TCGTGCTCGG CGGCAAGCCG GCCGAAGCGC AGCCGATGCT CTCGCAAGAG CTCGCCCGCG CGACCGGCGA GAATCGCGGC CAGGCGATCA TCGCGCTGCA GGCGCTGCTC GCGCGCGGGC CGAACCGCGT CGGCGGCCTG ACGGTGCTCC AGGATCTGCT GAAGAACGAC ATGGGCCGGC CCGAGGCGCG GCTCGCGATC GCGCGCCAGC AACTCGCCAC CGACGACAAG GACGGCGCGA CGCAATCGCT GAAGGAAGCG CTGCGCATCA AGCCCGATTA TCTGCCGGCG GCGCTGATGC TGTCGCAGAT GGGCCCGGGC GAGCGCGCGG CCGGAATCGC GTCGTTCGAG AAGTTCGTCC AGCAGAATCC GAAATCGCGC GACGGCCGCC TCGCGCTCGC GCAACTGTAT CTCGCCGACG ATCGCCTCGA CGACGCGCAA AAGCAGTTCG ACGCGATGCG CCGCAACGAT TCGAGCGACC CGACGCCGCT GATGGCGATC GCGCTCATCA AGATCCAGCA GAAGCACCTC GACGACGCGA CGACGTACCT GAAGCAATAC GTGAAGGTCG CGCAGAAGAA GCCGGGCGCG GACGTCGGCC AGGCGTACGT GTATCTCGCG CAGATCGCGC TCGACCAGAA CAACGAGGCG CTCGCCGCGC AATGGCTCGA CAAGGTCGAC GAAGCGAGCC AGCAGTACGT ACCCGCGCAG GTCACGCGCG CGCAGTTGCT GCAGAAGCAG GGCAAGGCCG ACGAAGCGCG CAAGCTGCTC GCGAACCTGC AGGCGTCCGA CCCGCGCGAC GCCGCGGTGA TCGCGCGCAC CGACGCGTCG ATCCTCTTCA CGTCGAAGCG CTACAAGGAA GCCGCCGACC GGCTCGCGCA GGCCGTCGAG GATTTCCCGG ACGATCCCGA TCTGCGCTAC GACTACGCGA TGGCGAGCGA GAAGATCGGC CAGTACACGA CGATGGAACA GCAGTTGCGC CTGCTGATGC GTGCGCAGCC CGACAATCCG CAAGCCTACA ACGCGCTCGG CTATTCGCTC GCGGACCGCA ACCTGCGCCT GCAGGAAGCG AGCAAGCTGA TCGAGAAGGC GAACTCGCTC GCGCCGAACG ACGCGTTCAT CATGGACAGC CTCGGCTGGG TCAAGTATCG CCTCGGCGAC ACGGCGGGCG CGACGGCGAT CCTGAAACGC GCTTACGACC TGCAGCCGAA CGCGGAAATC GGCGCGCACC TGGGCGAAGT GCTGTGGAGA AGCGGCTCGC GCGACGAAGC GCGCGCCGCA TGGCGCGCGG CGCAGAAGCT CGAACCCGAC AACGATACGC TCGTGCAGAC GCTCAAGCGC CTTCAGGTGA ACGGACTTTG A
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Protein sequence | MTLPLKLSQK RLAAARGPRA VPVRRAIGAA LVAAWALAAL PAHAQDDAGD DAPQAAFASA LPEEQKDLPN VALTSQIVYQ VLAAEVALQR SLPAPAYQTY LALARDTRDP RMAQRATEIA LAAQSPADAL TAANLWREYS PGSQRAAQVD AALLVLGGKP AEAQPMLSQE LARATGENRG QAIIALQALL ARGPNRVGGL TVLQDLLKND MGRPEARLAI ARQQLATDDK DGATQSLKEA LRIKPDYLPA ALMLSQMGPG ERAAGIASFE KFVQQNPKSR DGRLALAQLY LADDRLDDAQ KQFDAMRRND SSDPTPLMAI ALIKIQQKHL DDATTYLKQY VKVAQKKPGA DVGQAYVYLA QIALDQNNEA LAAQWLDKVD EASQQYVPAQ VTRAQLLQKQ GKADEARKLL ANLQASDPRD AAVIARTDAS ILFTSKRYKE AADRLAQAVE DFPDDPDLRY DYAMASEKIG QYTTMEQQLR LLMRAQPDNP QAYNALGYSL ADRNLRLQEA SKLIEKANSL APNDAFIMDS LGWVKYRLGD TAGATAILKR AYDLQPNAEI GAHLGEVLWR SGSRDEARAA WRAAQKLEPD NDTLVQTLKR LQVNGL
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