Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1885 |
Symbol | |
ID | 4893681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 1863964 |
End bp | 1865406 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640150540 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001081422 |
Protein GI | 126449331 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCACG GTCTGCACGG CCCCAAGCGC TGGTATGCGC TCGTCGTTCT CTGTCTGGGC GTGCTGATGA TCGTGCTCGA TTCGACGATC GTCAACGTCG CGCTGCCGTC GATCGGCGCG GACCTGCACT TCACCGAAAC CGCGCTCGTC TGGATCGTGA ACGCTTACAT GCTGACGTTC GGCGGCTGCC TGCTGCTGGG CGGCCGGCTC GGCGATCTGT ACGGCCAGCG CCGGATGTTC CTCGCCGGCC TCACGCTGTT CACGCTCGCA TCGCTCGCGT GCGGGCTCGC GCCAACGCAG TTCGTGCTGA TCGCCGCGCG CGCGGTGCAG GGGTTCGGTG GCGCGGTGGT GTCCGCCGTC GCGCTGTCGC TCATCATGAA TCTCTTCACC GAGCCGGGCG AGCGCGCGAA GGCGATGGGC GTCTACAGCT TCGTCTGCGC GGGCGGCGGC AGCCTCGGCG TGCTGCTCGG CGGCGTCCTC ACGAGCGTGC TCAGCTGGCA CTGGATCTTC CTCGTCAATC TGCCGATCGG CGTCGCCGCG TACGCGCTGT CCGCCGCGCT GCTGCCGAAG GTGCGCCCGC AGGCGGCCGA CGCGCGGCTC GACGTCGCGG GCGCGATCGC CGTGACCGCT TCGCTGATGC TCGCCGTCTA CGGCATCGTC AACGGCAACG AGGCCGGCTG GCTGTCGACG CAGACGGTCG CGACGCTCGC AGGCGCGGCC GCGCTGCTCG CGGCGTTCAT CGCGATCGAG ACGCGCGCCG CGCATCCGCT GATGCCGCTC GCGCTCGCCA CGCAGCGCAA CGTCGCGGTC GCGAACGTGA TCGGCGTGCT GTGGGCGGCC GCGATGTTCG CGTGGTTCTT TCTTTCCGCG CTCTACATGC AGCGCGTGCT CGGCTACGGG CCGCTCCAGG TCGGCCTGGC GTTTCTGCCC GCGAACCTGA TCATGGCCGC GTTCTCGCTC GGCTTGTCCG CGAAGATCGT GATGCGCTTC GGCATCCGCC GCGCGATCGG CGCCGGGCTC GTCATCGCGG CCGCGGGCCT TGCCCTCTTC GCGCGTGCAC CCGCCGACGG CGGCTTCGTC GCGCACGTGC TGCCGGGGAT GATACTCGTC GGCGTCGGCG CGGGCGTCGC GTTCAATCCG GTGCTGCTCG CCGCGATGAG CGACGTCGCG CCGAGCGATT CGGGGCTTGC CTCGGGCATC GTCAACACCT CGTTCATGAT GGGCGGCGCC CTCGGCCTCG CGGTGCTCGC GAGCGTCGCG TCCGCGCGCA CCGACGCGCT CGCCGCCGCG CGCGCGGCGC TGCCCGTCGC GCTCAACGGC GGCTATCACG CGGCGTTCGC GTGCGGCGCG GCATTCGCGG CGCTGGCCGC CGGTCTCGCG TACGCGCTGC GCATCCGCGC GCAGTCGAAC GCCGCGGCCG AACTGCACGG CGCCGCGCAC TGA
|
Protein sequence | MTHGLHGPKR WYALVVLCLG VLMIVLDSTI VNVALPSIGA DLHFTETALV WIVNAYMLTF GGCLLLGGRL GDLYGQRRMF LAGLTLFTLA SLACGLAPTQ FVLIAARAVQ GFGGAVVSAV ALSLIMNLFT EPGERAKAMG VYSFVCAGGG SLGVLLGGVL TSVLSWHWIF LVNLPIGVAA YALSAALLPK VRPQAADARL DVAGAIAVTA SLMLAVYGIV NGNEAGWLST QTVATLAGAA ALLAAFIAIE TRAAHPLMPL ALATQRNVAV ANVIGVLWAA AMFAWFFLSA LYMQRVLGYG PLQVGLAFLP ANLIMAAFSL GLSAKIVMRF GIRRAIGAGL VIAAAGLALF ARAPADGGFV AHVLPGMILV GVGAGVAFNP VLLAAMSDVA PSDSGLASGI VNTSFMMGGA LGLAVLASVA SARTDALAAA RAALPVALNG GYHAAFACGA AFAALAAGLA YALRIRAQSN AAAELHGAAH
|
| |