Gene BMA10247_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1583 
Symbol 
ID4894072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp1571482 
End bp1572570 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID640150240 
Productputative outer membrane porin 
Protein accessionYP_001081127 
Protein GI126448018 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0360665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TTATGCTCGC GGCGGTACTG GCGACTGCCG GAGTGGCGGC TCACGCTCAA 
AGCAGCGTGA CGCTGTACGG CCGTCTGGAC GCCGGCATCG AATACATGAA CGGCCTGCCG
AGCGCGAACG GCGGCAGCAC GAGCCGCTGG CGCGCGGAAA GCGGCAACTG GGGCACGAGC
CTCTGGGGCT TGAAGGGCTC CGAGGACATC GGCGGCGGCA ACAAGATCGT GTTCCAGTTG
GAAGGCAGCT TCGACACGAT GAACGGCAAC GGCCCGGGCG CCGGCAGCAT CTGGAACCGC
TGGGCAACGA TCGGCATCTC CAACGACACG TACGGTACCC TGCTGCTCGG CCGCGAGCTC
GCGATCGCGA ACGGCGTGTG GGACTTCGAT CCGTTCGGCC AGTCGTCGTG GTCGACGGCT
TCGCTCGTGC GCGGGCGCAA CTGGAACAAG ACCAGCAACA ACATTTCGTA TCAATCGCCG
AAGTTCTACG GCTTCGACGT CTACGGCCAA TACGCGCTGT CGAACGCGAC GAACTGGAAC
GGCAACGGCT CGACGAGCCA GGGCCGCAGC GCGGGCCTGC AGCTCACCTA CACGACCTCG
CTGTTCCAGA TCCGCGGCCT CTATGACGAA GCGCGCGATC CGGCGAACGG CAAGCTCGAC
GACGTGTTCA ACTACTCGCG CGAATATTTC GCTGGCGTGA ACGTGTTCCT CGGCCAGTTC
AAGCTGCAGG CGGCATACCA GGCGTCGCAC GCGGACGGCG GCCCGGTCGT GAACAACGGC
ATCACGACGA CCCAGCAGGT CTGGGGCGGC GTGACGTGGC AGGCAACGCC CGCCGCCGCG
CTGATCGCGG CCGTCTATCA CGTGAACGCG AATCACGGCG GCGGCAACGC GAACATCTTC
ACGGTCGGCG GCTCGTACAA CCTGTCGAAG CGCACGCTGC TCGACGTGCA GGTCGCGACG
GTGCGCAACA GCAAGACCGC GAACTTTGGC CTGAACGCGA ACCCGGCCGG CACCGACATC
TCGACCGGCA ATCCGAAGTT CGGCGGCAGC CAGACGGGCG TGTACGCCGG CATCCAGCAC
CTGTTCTGA
 
Protein sequence
MKKVMLAAVL ATAGVAAHAQ SSVTLYGRLD AGIEYMNGLP SANGGSTSRW RAESGNWGTS 
LWGLKGSEDI GGGNKIVFQL EGSFDTMNGN GPGAGSIWNR WATIGISNDT YGTLLLGREL
AIANGVWDFD PFGQSSWSTA SLVRGRNWNK TSNNISYQSP KFYGFDVYGQ YALSNATNWN
GNGSTSQGRS AGLQLTYTTS LFQIRGLYDE ARDPANGKLD DVFNYSREYF AGVNVFLGQF
KLQAAYQASH ADGGPVVNNG ITTTQQVWGG VTWQATPAAA LIAAVYHVNA NHGGGNANIF
TVGGSYNLSK RTLLDVQVAT VRNSKTANFG LNANPAGTDI STGNPKFGGS QTGVYAGIQH
LF