Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1411 |
Symbol | |
ID | 4891540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1393692 |
End bp | 1398851 |
Gene Length | 5160 bp |
Protein Length | 1719 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640150069 |
Product | linear gramicidin synthetase subunit C |
Protein accession | YP_001080959 |
Protein GI | 126448739 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
TIGRFAM ID | [TIGR01720] non-ribosomal peptide synthase domain TIGR01720 [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.750656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTGCG ATGTCGCGTG GGCCGGCGCG CCCGATGCGG CGCTCGACGC CTTCTTCGCC GACGCGCGGC GCGGCGTGCG TCTCGCCGAC GGGCCGCTCT TCGTCGCGGC GCTGGTCGCG GCCGGCGCGA CGGGGCGGGG CCGCCTGCTG CTGATCGGGC ATCACGCGGT GGTCGACGGC GTATCGTGGC GCGTCATCGT CGCGGACCTG CGGCGGACGT TCGCGCAATG GCCGGCGCTG CGCCCGGACG CGCCCGGGCC GGCGAGCGAT GCGTATCAGG CGTGGGCGCG CGCGCTCGTC GCGGCGGCCG ACAGCCCGGC GCTGCACGCG GAGCGCGCGC ACTGGCTGCG CGTGCTCCGC GCGCCGGCCC CGGCGCTGCG GCTCGATCGC GCCGCCGGCG GCGACGCCAC GCGCCGCGCG ACGCGCATCG GGGCGGTGAG CCTGAACGCG GCCGATACCC GCGCGCTGTT GGCCGACACG CACCGCGCGT ACCGGACGCA GACCATCGAG CTGCTGCTCG CCGGGCTGCT GCTCGCGTTC CGCCGCTGGC AGGGCCATGA CGCGCTGCGC ATCGCGCTCG AGGGCCACGG GCGCGAGGCC GACGCGCTCG CGCACTACGG CGCCGAGCGC GGGTTACCCG ACGTGGGCGA GACGGTGGGC TGGTTCACGA GCTATTACCC GCAATGGCTG ACGCTCGCGG GCGCCGCTTC CGCGCCCGCG CCGGCGGCGG ACTCCGTGGC CGCGGCGATC ATGGCGGTCA AGACGCAGTA TCGCGCGACG CCGCATCACG GCATCGGCTA CGGCATCCTG CGTTACGTCG CGGGCGACCC CGAACTGGCC GCGGAAGCCG CCGCGCACGC ACCGGAGATC GTCTTCAACT ATCTCGGGCA GTTCGACGTC GCAAACGACG AGGCCGCCGG CATCGCGGTG CTCGACCTGT CCTCGCGCGA CGACATCGCG GCGGCGCGGC CGCGCGAGCA CGCGCTCGGC ATCGACGGCG GGGTCAAGGA CGGCTGCCTC GCGTTCGAGA TCGACTACTC GGGCGCCGCG TTCGACGATG AGTCGATCGC GGCGTTCGGC GCGCATTTCA TGCATGCGCT GCGGGAGATC GCCGCGCATT GCAAGGCGTG CGCCGCGTGG CGCCCGACGC CCGAGGATTT TCCGCTCGCC GCGGTGACGC AGGCCGAGCT CGACGCGTGG CACGCGCGCC ATCCGTCGCT CGAAACGCTG TATCCGGCGA CCGCGATCCA GCGGGGCATG GTGTTCCACA GCCTGCTGCC GAAGCAGGCG AGCGCCTATA CGAACCAGGT GCACGCGCGC GTCGGCGGCG GCACGTTCGA CGCCGCGCGC CTGCGACACG CGTGGCAGAC GGTCCTCGAG CGCCACGCGG CGCTGCGCAC CGCGTTCGTC GGCTTCGAGC GCGAGCAGCC GTTGCAGATC GTGCTCGCGC ACGCCGCGTG CCCGTGGCGC GACATCGATC ACCGGCACCT CGCGCCCGAG GCGCGCGATG CGGCGTTCGC GGCGCTGCTC GCGGCGGACA AGGCCGCGCC GTTCGATTTC GGCCGCGCGC CGCTGATGCG CTTTCATCTG GTGCGCGACG ACGATGCGCA CTACCGCTTC ATCTGGACCT ATCACCACGC GGTGCTCGAC GGATGGAGCG TGCAGCTCGT CTGGTCCGAT CTGCTGCGCG TCTACGAGGC ACTGGCGGCC GGCCGGCCCG CGGCGTTGCC GGCCGCCGTG CAGTTCGACG CGGTGCTCGC GTGGCGGCAG CGGCACGCGA GCGATGCGGA CAAGCGCTAT TGGCGTGAGC AGATCGGCGC GCGCACGCAA CGCACCGTGC TCGACATCGA GCAGGCCGGG CTCGCGGCGG CTTCGCCCGC CGCGCCCGCC GTCGTCGAGC GCTCGCTCGA CGAGGCGGCG AGCGAGCGCC TCGCGACGGC CGCGCGCGCG TGCCGGGTCA CGCTCGCGTC GGTGCTGCAG GCGGCCTGGG CGCTGCTGCT CGCGCGCCAT AGCGGCGAGA CGGCGCCCGT GTTCGGCGTG ACGAGCTCGG GGCGCGCGAT CGACGTGCCC GGCGTCGAGA CGATCGTCGG CCCGCTGATC GCGACGGTGC CCGCGCGCGT CGACGTCGAC GCGGCGCTGC CGCTTGGGGA CTGGCTGCGC GCGGTGCACG AGCGGCACGT CGAGCGGGAG GCGCACGCGC AGCTCGAGCT CGTCGACATC CTGCGCGAGA GCGGCGTGCG CGGCGGGCAG CCGCTCTTCG ACAGCCTGCT CGTCGTCGAG AACTATCCGC TCGCCGAACC CAGCGCGGCG CGCATTCTCG GTCTGCGCGA TTACGGCTAC GCGGAGGACA CGCACTACGG GCTCACCGTA TCGGCGACGC CGGGGCCGCG TTTGCGCGTC GAAATCAATT TTGATCGTTC GCGGTACCAC ATCGAGGATA TCGAAGCCAT GGCAGACAAC CTGAAAGCAG TGCTGACCCG CGTGCCGGAC GACCTCGCGC GCCCCGCCGG CGACGTGCTC GGCGGCGCCG ACGCCGCGCG CGCGCAAGCG GGCGCGGAAG GCGAGCCGCG GCTCAGCCGC GTGTCGCGGC AGGGCGAGTT GCGGCTCGGC CGTCATCTGG TGCCGCATCT GGTCGAGGAT CACGCGGCGG CCACGCCCGA GCGCCGCGCG CTCGTCTATA ACGAGCGCGC GTACAGCTAC GGCGAGTTGA ACCGGGCCGC GAACCGGATC GCGAATCGGC TGATGCAGGC GTTTCCCGAT CTCGGCACGG ACGCGCTCGT GGGCGTGCGC GTGTCGCGCA GCGACCGGCT GGTGCTGACG GTCCTCGCGA TCTGGAAGAT CGGCGCGGCC TACATTCCGA TCGATCCCGT GCTGCCCGGG CAGCGCATGC GCGAGATGCT CGAACTGGCG GGCGCGAAGG CGCTCGTCGT CGATGCGGCG GTGGCGGCCG CCGAGCCGGC CGTCGCCGGC GTGCCGCGCA TCGCGTTCGA CGATCTCGTG CAGGACGATC CGCGCCTCGA GGACAATCCC GACGTGCATC TGTCGGGCAA CGATCTGAGC TACGTGCTGT TCACGTCGGG ATCGACCGGC AAGCCGAAGG GCGCGATGAT CGAGCACATC GGCATGCTGA ACAACATCGC GAACAAGGCG CTCGATCTCG AGATGGACGA AGACAGCCGG GTCGCGCAGA ACGCGTCGAT GAGCTTCGAC GTGTCGGTCT GGCAGATGTT CATCGCGCTC ACGAAGGGCG GCACGACGTT CGTCTACGAC GAGCGTGCCG TCAACGACAT CGCCGGGCTG ATCCGCCGCA TGGCCGCCGA CGGCGTGACG ATTCTCGAGG TGGTGCCGAC CTATCTGATC GCCGTCGTCG AATACCTGGA GGAACATCCC GAGTGCGTGC GCCCCGCGTC GCTCAGGTTC CTGATCGTCA ACGGCGAGAC CGTCGACGCG ACGCTGATCC GGCGCTGGTT CGCGCTGTTC CCCGCGACGA AGCTCATCAA CGCGTACGGC CCGACCGAGG CGTCCGACGA CATCACGCAT CACATCATGT CGCCCGGCGA CGAGATCGTG AATCCGGTGC CGGTCGGCCG CGCGCTCGCC AATTTCGATC TCTACGTCGT CGACGACGAA CTGCGCCCGG TGCCGATCGG CACGCGCGGC GAGATCGTGG CCACCGGCGT CGGCATCGGG CGCGGCTACA TCGGCATGGC GGGCGCGACC GCGCAGGCGT TCGTGAAGAG CCCGTTCCCC GACCGCTACA AGGGGCGCCT GTACCGCACG GGCGACCTCG GCGAGATGCG CGAGGACGGC GTGCTGATGT TCCATGGCCG CAAGGATCGG CAGGTGAAGA TTCGCGGGAT GCGCATCGAG CTCGACGAGG TGGAGGCGAG CCTGCGCGCG ATCGCGGCGG TCCGCCAGGC GGTGGTGCTC GCGATTCGGC CCGAGAACCG CGAGGCGTTC CTCTGCGCGT GCGTGGTGCC GCTCGACGGC GCGCGCGAGG AGATCGTCGA CGCGCTGAAG GCGAAGCTGC CGCCGTACAT GGTGCCGTCC GTGTTCCGCT TCGAGCGGGA ACTGCCGCAA TTGCCGAGCG GCAAGGTGGA CCGCAACCGG CTGCGCGAGC AGTGCCTGAA CGAAACGCCG CGCGCGAGCG AGCACGCGCT CGCGCCGCGC TCGCCGCTCG AGCGGCGCCT GGCGGAGGTC TTTGGCGAGG TGCTCGGCCA CGACGCGTTC GGCGTGCTCG ACGATTTCTT CGCGCTCGGC GGCGACTCGT TCAAGGCGAT CCGCATCGCG GCCAAGTACG GTCCGCCGCT CGAGGTGACC GATATCTACG ATCATCCGAC GATCGAGGCG CTTGCCGCAC ATCTCGAGCG CGCGCCCCGG GCCGAGCGCT CGATCGTGCA GATGGCGGGC GATCCGGCGA CGGCGAAGGC CGCGCTCGTG TGCATCGCGA ATGCGGCGGG CGGCCCGGTC AACTTCGTCG AGATGAGCCG GGCGATGGCG GAGCAGGCGG GCGAGCTCGC GGTGTTCGCG GTGAAGCTGC CGCGCAACGC GGTGGACAGC GACGCGGCGA TGCTCGCCGA GGTGACGCGC CTCGCGAACG CGGTGTGCGA CGATCTGCTC GCCGCGAGCG GGCTGCCGAT CATCGTGTTC GCGCAATGCA ACGGCTCGGC GCTCGCGATC GCCGTCGCGC GCGAACTGAC GAGGCGCTCG GCCGACCTGC GCGCGCTGTG CATGGGCGGC GCGCTGATGC GCACGGCGAG CGGCAAGCGC GATGCGCGCA CCGACGACGA AATCCTCGGC TTTCTCGGCG GCATCGGCTC GACGCTGCCG GGCCGCCCCG ACGAGCGCGC GTTCTTCCTG CACGAGTTCC GCTACGACAG CTGGCTCGCC GACGTCTATT ACAACCACCT CGTCGACGAG GCGAGCCGCG GCGCGCTCAC GCCGCTCGAC ATTCCGGTGT GGTGCCTCGT CGGCACCGAC GATCCGCTCG TGTCGCAGTA CGAGACGCGC CACCGCGACT GGTTGCGCAT CGGGCGCAGC GTGAAGCTCG CCGAGTTCGC GGGCATCGGC CATTACCTGC TGCGCGATTG CCCGCACGCG CTCGCGCGCA CGCTCGGCCA AGCGTGGGAA GCCGTGTCCC GCCGGAGCGT CGAGGCATGA
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Protein sequence | MVCDVAWAGA PDAALDAFFA DARRGVRLAD GPLFVAALVA AGATGRGRLL LIGHHAVVDG VSWRVIVADL RRTFAQWPAL RPDAPGPASD AYQAWARALV AAADSPALHA ERAHWLRVLR APAPALRLDR AAGGDATRRA TRIGAVSLNA ADTRALLADT HRAYRTQTIE LLLAGLLLAF RRWQGHDALR IALEGHGREA DALAHYGAER GLPDVGETVG WFTSYYPQWL TLAGAASAPA PAADSVAAAI MAVKTQYRAT PHHGIGYGIL RYVAGDPELA AEAAAHAPEI VFNYLGQFDV ANDEAAGIAV LDLSSRDDIA AARPREHALG IDGGVKDGCL AFEIDYSGAA FDDESIAAFG AHFMHALREI AAHCKACAAW RPTPEDFPLA AVTQAELDAW HARHPSLETL YPATAIQRGM VFHSLLPKQA SAYTNQVHAR VGGGTFDAAR LRHAWQTVLE RHAALRTAFV GFEREQPLQI VLAHAACPWR DIDHRHLAPE ARDAAFAALL AADKAAPFDF GRAPLMRFHL VRDDDAHYRF IWTYHHAVLD GWSVQLVWSD LLRVYEALAA GRPAALPAAV QFDAVLAWRQ RHASDADKRY WREQIGARTQ RTVLDIEQAG LAAASPAAPA VVERSLDEAA SERLATAARA CRVTLASVLQ AAWALLLARH SGETAPVFGV TSSGRAIDVP GVETIVGPLI ATVPARVDVD AALPLGDWLR AVHERHVERE AHAQLELVDI LRESGVRGGQ PLFDSLLVVE NYPLAEPSAA RILGLRDYGY AEDTHYGLTV SATPGPRLRV EINFDRSRYH IEDIEAMADN LKAVLTRVPD DLARPAGDVL GGADAARAQA GAEGEPRLSR VSRQGELRLG RHLVPHLVED HAAATPERRA LVYNERAYSY GELNRAANRI ANRLMQAFPD LGTDALVGVR VSRSDRLVLT VLAIWKIGAA YIPIDPVLPG QRMREMLELA GAKALVVDAA VAAAEPAVAG VPRIAFDDLV QDDPRLEDNP DVHLSGNDLS YVLFTSGSTG KPKGAMIEHI GMLNNIANKA LDLEMDEDSR VAQNASMSFD VSVWQMFIAL TKGGTTFVYD ERAVNDIAGL IRRMAADGVT ILEVVPTYLI AVVEYLEEHP ECVRPASLRF LIVNGETVDA TLIRRWFALF PATKLINAYG PTEASDDITH HIMSPGDEIV NPVPVGRALA NFDLYVVDDE LRPVPIGTRG EIVATGVGIG RGYIGMAGAT AQAFVKSPFP DRYKGRLYRT GDLGEMREDG VLMFHGRKDR QVKIRGMRIE LDEVEASLRA IAAVRQAVVL AIRPENREAF LCACVVPLDG AREEIVDALK AKLPPYMVPS VFRFERELPQ LPSGKVDRNR LREQCLNETP RASEHALAPR SPLERRLAEV FGEVLGHDAF GVLDDFFALG GDSFKAIRIA AKYGPPLEVT DIYDHPTIEA LAAHLERAPR AERSIVQMAG DPATAKAALV CIANAAGGPV NFVEMSRAMA EQAGELAVFA VKLPRNAVDS DAAMLAEVTR LANAVCDDLL AASGLPIIVF AQCNGSALAI AVARELTRRS ADLRALCMGG ALMRTASGKR DARTDDEILG FLGGIGSTLP GRPDERAFFL HEFRYDSWLA DVYYNHLVDE ASRGALTPLD IPVWCLVGTD DPLVSQYETR HRDWLRIGRS VKLAEFAGIG HYLLRDCPHA LARTLGQAWE AVSRRSVEA
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