Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1048 |
Symbol | |
ID | 4892387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1040977 |
End bp | 1042275 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640149707 |
Product | type II/III secretion system protein |
Protein accession | YP_001080603 |
Protein GI | 126448299 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.827787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGTTCG GCGTGCTGCT GTCGTTCGCC GCGCGGGCGG CCGAGACGGG GACGATCGAG CTCGCCGCGG GGACGCAGCG GCAGATTGCC GTCGGGCACG GCGTGCAGCG GGTCGCCATC GCAGACCCGA ACGTCGCCGA CGTGCTCGTC ATCAAGGGCG GCCGCGGCGG CGTGCTGCTC GTCGCGAAGG CGGCCGGCAC GACGAGCCTG ATGGTGTGGG AGCGCGGCCG CGACGAGCCG GCGGCCTACA CGGTCAACGT CGTGAGCGGC GCGGCGCGCG CGCTGCTCGA CGGCGGCTCG CCGAGCGTGA AGGCGTACAA CGGCACGGCG GTCGTGGCGG GCTCGGCCGC GACGCTCGAC GCGCATGCGC GCGCGCTCGC CGTCGGCAAG GGGATGGCGG GCAAGGACGG CGGCGTCCTC GACGTATCGA CGGTCGGCGG CAAGAACGTC GTGCAGGTCG ACGTGCGCGT CGTCGAATTC AGCCGCTCGG TGCTCAAGCA GGCGGGCCTG AATTTCTTCA AGCAGAACAA CGGCTTCACG TTCGGCTCGT TCGCGCCCGC CGGCCTCGCG TCGGTGACGG GCGGCGGCAC GTCGTCGATG TCGGTGTCGG CGAACATTCC GATCGCGTCC GCGTTCAACC TCGTCGTCGG CTCGGCGACG CGCGGCCTGT TCGCCGATCT GTCGATCCTC GAGGCGAACA ACCTCGCGCG CGTGCTCGCG CAGCCGACGC TCGTCGCGCT GTCCGGGCAG AGCGCGAGCT TCCTCGCGGG CGGCGAGATC CCGGTGCCGG TGCCGCAGTC GCTCGGCACG ATCTCGATCG ACTGGAAGCC GTACGGCGTC GGCCTCACGC TGACGCCGAC CGTGCTGAGC CCGCGCCGGA TCGCGCTGAA GGTCGCGCCC GAATCGAGCC AGCTCGACTT CGTCCATTCG ATCACGATCA ACGGCGTGAC GGTGCCCGCG CTCACGACGC GCCGCGCGGA CACGACCGTC GAGCTGGGCG ATGGCGAGAG CTTCGCGATC GGCGGGCTGA TCGACCGCGA GACGACGTCG AACGTCGACA AGGTGCCGTT CCTCGGCGAT CTGCCGATCA TCGGCACGTT TTTCAAGCAT CTCAGCTATC AGCAGAACGA CAAGGAGCTC GTGATCATCG TGACGCCGCA TCTCGTCGCG CCGATCGCGA AGAACGCGTC GCTGCCCGCG ACGCCCGGCG AGCTGTCCGA ACAGCGCGAC GGGCCGGTGT GGCGGTCGTA TCTCGGCGGC GTGCTGTCGC CGGATGCGGG GCCGGGGTTC TCGAAATGA
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Protein sequence | MAFGVLLSFA ARAAETGTIE LAAGTQRQIA VGHGVQRVAI ADPNVADVLV IKGGRGGVLL VAKAAGTTSL MVWERGRDEP AAYTVNVVSG AARALLDGGS PSVKAYNGTA VVAGSAATLD AHARALAVGK GMAGKDGGVL DVSTVGGKNV VQVDVRVVEF SRSVLKQAGL NFFKQNNGFT FGSFAPAGLA SVTGGGTSSM SVSANIPIAS AFNLVVGSAT RGLFADLSIL EANNLARVLA QPTLVALSGQ SASFLAGGEI PVPVPQSLGT ISIDWKPYGV GLTLTPTVLS PRRIALKVAP ESSQLDFVHS ITINGVTVPA LTTRRADTTV ELGDGESFAI GGLIDRETTS NVDKVPFLGD LPIIGTFFKH LSYQQNDKEL VIIVTPHLVA PIAKNASLPA TPGELSEQRD GPVWRSYLGG VLSPDAGPGF SK
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