Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0999 |
Symbol | typA |
ID | 4892061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 982791 |
End bp | 984617 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640149660 |
Product | GTP-binding protein TypA |
Protein accession | YP_001080558 |
Protein GI | 126451057 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.191284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGCG CCCTTCGCAA CATCGCCATC ATCGCCCACG TCGACCACGG CAAGACGACG CTCGTCGACC AACTGCTTCG CCAGTCCGGC ACCTTCCGCG AGAACCAGCA GGTCGCCGAG CGGGTGATGG ACTCGAACGA CATCGAAAAG GAGCGCGGGA TCACGATCCT CGCGAAGAAC TGCGCGGTCG AATACGAGGG CACGCACATC AACATCGTCG ACACGCCCGG GCACGCGGAC TTCGGCGGCG AAGTGGAGCG CGTGCTGTCG ATGGTCGACT CGGTGCTGCT GCTCGTCGAC GCGGTCGAGG GCCCGATGCC GCAGACCCGC TTCGTGACGA AGAAGGCGCT CGCGCTCGGC CTGAAGCCGA TCGTCGTGAT CAACAAGATC GACCGCCCGG GCGCACGCAT CGACTGGGTG ATCAACCAGA CCTTCGACCT GTTCGACAAG CTCGGCGCGA CCGAGGAGCA GCTCGATTTC CCGATCGTCT ACGCGTCGGG CCTGAACGGC TACGCGTCGC TCGATCCGGC CGCGCGCGAC GGCGACATGC GTCCGCTCTT CGAGGCGATC CTCCAGCACG TGCCGGTTCG CCCGGCCGAC CCGGACGCGC CGCTGCAACT GCAGATCACC TCGCTCGACT ATTCGACGTA CGTCGGCCGC ATCGGCGTGG GCCGCATCAC GCGCGGGCGC ATCAAGCCGG GCCAGCCGGT CGTGATGCGC TTCGGTCCGG AAGGCGACGT GCTCAACCGC AAGATCAACC AGGTGCTGTC GTTCCAGGGG CTCGAGCGCG TGCAGGTGGA CTCGGCCGAG GCGGGCGACA TCGTCCTCAT CAACGGCATC GAAGACGTCG GCATCGGCGC GACGATCTGC GCGGTGGAGG CGCCCGAAGC GCTGCCGATG ATCACCGTCG ACGAGCCGAC GCTGACGATG AACTTCCTCG TCAATTCGTC GCCGCTCGCC GGCCGCGAAG GCAAGTTCGT GACGAGCCGC CAGATCCGCG ATCGCCTGAT GAAGGAGCTG AACCACAACG TCGCGCTGCG CGTGAAGGAT ACCGGCGACG AAACGGTGTT CGAGGTGTCG GGCCGCGGCG AGCTGCACCT GACGATCCTG GTCGAGAACA TGCGCCGCGA GGGCTACGAG CTCGCCGTGT CGCGTCCGCG CGTCGTGATG CAGGAGATCG ACGGCGTGAA ACACGAGCCG TACGAGCTGC TGACGGTCGA CCTCGAGGAC GAGCACCAGG GCGGCGTGAT GGAGGAGCTC GGCCGCCGCA AGGGCGAAAT GCTCGACATG GTGTCCGACG GGCGCGGCCG CACGCGTCTC GAGTACCGGA TTCCGGCGCG CGGCCTGATC GGCTTCCAGA GCGAGTTCCT GACGCTCACG CGCGGCACGG GCCTGATGAG CCACATCTTC GATTCGTACG CGCCCGTCAA GGAAGGCTCG GTCGGCGAGC GCCGCAACGG CGTGCTGATC TCGCAGGACG ACGGCGCTGC GGTGGCATAC GCGCTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTGA AGCCGGGCGA TGCGCTTTAC GAGGGCATGA TCATCGGCAT TCACAGCCGC GACAACGACC TCGTCGTGAA CCCGATCAAG GGCAAGCAAC TGACCAACGT GCGCGCGTCG GGCACCGACG AAGCGGTGCG CCTCGTGCCG CCGATCCAGA TGTCGCTCGA ATACGCGGTC GAATTCATCG ATGACGACGA GCTCGTCGAA GTGACGCCGC AGTCGATCCG CCTGCGCAAG CGCCACCTGA AGGAGCACGA GCGCCGCCGC GCGAGCCGCG AGGCCGAGGC CGGCTGA
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Protein sequence | MTRALRNIAI IAHVDHGKTT LVDQLLRQSG TFRENQQVAE RVMDSNDIEK ERGITILAKN CAVEYEGTHI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG LKPIVVINKI DRPGARIDWV INQTFDLFDK LGATEEQLDF PIVYASGLNG YASLDPAARD GDMRPLFEAI LQHVPVRPAD PDAPLQLQIT SLDYSTYVGR IGVGRITRGR IKPGQPVVMR FGPEGDVLNR KINQVLSFQG LERVQVDSAE AGDIVLINGI EDVGIGATIC AVEAPEALPM ITVDEPTLTM NFLVNSSPLA GREGKFVTSR QIRDRLMKEL NHNVALRVKD TGDETVFEVS GRGELHLTIL VENMRREGYE LAVSRPRVVM QEIDGVKHEP YELLTVDLED EHQGGVMEEL GRRKGEMLDM VSDGRGRTRL EYRIPARGLI GFQSEFLTLT RGTGLMSHIF DSYAPVKEGS VGERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVKPGDALY EGMIIGIHSR DNDLVVNPIK GKQLTNVRAS GTDEAVRLVP PIQMSLEYAV EFIDDDELVE VTPQSIRLRK RHLKEHERRR ASREAEAG
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